RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 TSPY8P0CW00 308 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 ELOA2Q8IYF1 753 aaPredicted RBP24.85■■□□□ 1.57
RNF39-202ENST00000376751 TCP11L1Q9NUJ3 509 aa24.85■■□□□ 1.57
RNF39-202ENST00000376751 COL11A2P13942 1736 aaPredicted RBP24.85■■□□□ 1.57
RNF39-202ENST00000376751 FAM205AQ6ZU69 1335 aa24.84■■□□□ 1.57
RNF39-202ENST00000376751 ACTN4O43707 911 aaKnown RBP24.84■■□□□ 1.57
RNF39-202ENST00000376751 BMP6P22004 513 aa24.84■■□□□ 1.57
RNF39-202ENST00000376751 NT5C2P49902 561 aa24.84■■□□□ 1.57
RNF39-202ENST00000376751 OLFM4Q6UX06 510 aa24.84■■□□□ 1.57
RNF39-202ENST00000376751 SP8Q8IXZ3 490 aa24.84■■□□□ 1.57
RNF39-202ENST00000376751 GRAMD1CQ8IYS0 662 aa24.84■■□□□ 1.57
RNF39-202ENST00000376751 FAM163AQ96GL9 167 aaPredicted RBP24.84■■□□□ 1.57
RNF39-202ENST00000376751 MAD2L2Q9UI95 211 aa24.84■■□□□ 1.57
RNF39-202ENST00000376751 A0A087X0B3 334 aa24.83■■□□□ 1.57
RNF39-202ENST00000376751 IKBKBO14920 756 aa24.83■■□□□ 1.57
RNF39-202ENST00000376751 NLRP5P59047 1200 aa24.83■■□□□ 1.57
RNF39-202ENST00000376751 ZNF174Q15697 407 aa24.83■■□□□ 1.57
RNF39-202ENST00000376751 TTC38Q5R3I4 469 aa24.83■■□□□ 1.57
RNF39-202ENST00000376751 COL23A1Q86Y22 540 aaPredicted RBP24.83■■□□□ 1.57
RNF39-202ENST00000376751 ZNF444Q8N0Y2 327 aaPredicted RBP24.83■■□□□ 1.57
RNF39-202ENST00000376751 PDILTQ8N807 584 aa24.83■■□□□ 1.57
RNF39-202ENST00000376751 CDK8P49336 464 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 POSTNQ15063 836 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 DNTTIP2Q5QJE6 756 aaKnown RBP24.82■■□□□ 1.56
RNF39-202ENST00000376751 C16orf86Q6ZW13 317 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 CERS3Q8IU89 383 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 TBC1D22AQ8WUA7 517 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 GPKOWQ92917 476 aaPredicted RBP eCLIP24.82■■□□□ 1.56
RNF39-202ENST00000376751 TMEM47Q9BQJ4 181 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 ATP6V0A2Q9Y487 856 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 SMTNL1A8MU46 457 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 RIMBP2O15034 1052 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 GTF2IP78347 998 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 RASGRP2Q7LDG7 609 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 AKT1S1Q96B36 256 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 XPO4Q9C0E2 1151 aaKnown RBP24.82■■□□□ 1.56
RNF39-202ENST00000376751 IFNKQ9P0W0 207 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 MAN1B1Q9UKM7 699 aa24.82■■□□□ 1.56
RNF39-202ENST00000376751 CCDC178Q5BJE1 867 aa24.81■■□□□ 1.56
RNF39-202ENST00000376751 PIK3AP1Q6ZUJ8 805 aa24.81■■□□□ 1.56
RNF39-202ENST00000376751 TMC4Q7Z404 712 aa24.81■■□□□ 1.56
RNF39-202ENST00000376751 EPSTI1Q96J88 318 aa24.81■■□□□ 1.56
RNF39-202ENST00000376751 DAGLAQ9Y4D2 1042 aa24.81■■□□□ 1.56
RNF39-202ENST00000376751 PLCG2P16885 1265 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 LMOD1P29536 600 aaPredicted RBP24.8■■□□□ 1.56
RNF39-202ENST00000376751 QSER1Q2KHR3 1735 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 SRGNP10124 158 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 ATP1A3P13637 1013 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 TYW1BQ6NUM6 668 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 FILIP1Q7Z7B0 1213 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 LRRC8AQ8IWT6 810 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 MTMR7Q9Y216 660 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 ADAMTSL1Q8N6G6 1762 aa24.8■■□□□ 1.56
RNF39-202ENST00000376751 CYTH3O43739 400 aa24.79■■□□□ 1.56
RNF39-202ENST00000376751 SMC2O95347 1197 aa24.79■■□□□ 1.56
RNF39-202ENST00000376751 EYA3Q99504 573 aa24.79■■□□□ 1.56
RNF39-202ENST00000376751 STX8Q9UNK0 236 aa24.79■■□□□ 1.56
RNF39-202ENST00000376751 BMP15O95972 392 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 SARSP49591 514 aaKnown RBP24.78■■□□□ 1.56
RNF39-202ENST00000376751 ATP2C1P98194 919 aaPredicted RBP24.78■■□□□ 1.56
RNF39-202ENST00000376751 MYL5Q02045 173 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 NT5DC1Q5TFE4 455 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 CERS5Q8N5B7 392 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 SYMPKQ92797 1274 aaKnown RBP24.78■■□□□ 1.56
RNF39-202ENST00000376751 FERMT2Q96AC1 680 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 UQCRHLA0A096LP55 91 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 UQCRHP07919 91 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 TPM4P67936 248 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 PTGDRQ13258 359 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 SLF2Q8IX21 1173 aa24.78■■□□□ 1.56
RNF39-202ENST00000376751 HOOK1Q9UJC3 728 aaKnown RBP24.78■■□□□ 1.56
RNF39-202ENST00000376751 PALM3A6NDB9 673 aaPredicted RBP24.77■■□□□ 1.56
RNF39-202ENST00000376751 FANCCQ00597 558 aa24.77■■□□□ 1.56
RNF39-202ENST00000376751 NLGN1Q8N2Q7 840 aa24.77■■□□□ 1.56
RNF39-202ENST00000376751 NEDD1Q8NHV4 660 aa24.77■■□□□ 1.56
RNF39-202ENST00000376751 DHX58Q96C10 678 aa24.77■■□□□ 1.56
RNF39-202ENST00000376751 COA1Q9GZY4 146 aa24.77■■□□□ 1.56
RNF39-202ENST00000376751 SH3GLB2Q9NR46 395 aa24.77■■□□□ 1.56
RNF39-202ENST00000376751 GNAQP50148 359 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 WWC2Q6AWC2 1192 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 BLIDQ8IZY5 108 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 GOLGA8HP0CJ92 632 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 NPR1P16066 1061 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 TRAPPC10P48553 1259 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 MORC3Q14149 939 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 RASGRP4Q8TDF6 673 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 SMARCE1Q969G3 411 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 MXD3Q9BW11 206 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 OSBPL5Q9H0X9 879 aaPredicted RBP24.76■■□□□ 1.55
RNF39-202ENST00000376751 ZNF287Q9HBT7 754 aa24.76■■□□□ 1.55
RNF39-202ENST00000376751 VWA3AA6NCI4 1184 aa24.75■■□□□ 1.55
RNF39-202ENST00000376751 F8W031 263 aaPredicted RBP24.75■■□□□ 1.55
RNF39-202ENST00000376751 CALML3P27482 149 aa24.75■■□□□ 1.55
RNF39-202ENST00000376751 CCZ1BP86790 482 aa24.75■■□□□ 1.55
RNF39-202ENST00000376751 CCZ1P86791 482 aaPredicted RBP24.75■■□□□ 1.55
RNF39-202ENST00000376751 CPVLQ9H3G5 476 aa24.75■■□□□ 1.55
RNF39-202ENST00000376751 PCDHA4Q9UN74 947 aa24.75■■□□□ 1.55
RNF39-202ENST00000376751 M0R2N6 131 aa24.74■■□□□ 1.55
RNF39-202ENST00000376751 IL17AQ16552 155 aa24.74■■□□□ 1.55
RNF39-202ENST00000376751 SPATA20Q8TB22 786 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms