RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 CCPG1Q9ULG6 757 aa15.46■□□□□ 0.07
DDR1-225ENST00000376568 UTRNP46939 3433 aa15.46■□□□□ 0.07
DDR1-225ENST00000376568 MED23Q9ULK4 1368 aa15.46■□□□□ 0.06
DDR1-225ENST00000376568 USP17L15C9J2P7 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L13C9JLJ4 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L11C9JVI0 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L18D6R9N7 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L22D6RA61 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L17D6RBQ6 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L19D6RCP7 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L20D6RJB6 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 MSNP26038 577 aaKnown RBP15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L24Q0WX57 530 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 USP17L6PQ6QN14 398 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 CCDC148Q8NFR7 591 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 KANSL2Q9H9L4 492 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 IVNS1ABPQ9Y6Y0 642 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 F5H6K3 240 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 KLRC3Q07444 240 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 DGKZQ13574 1117 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
DDR1-225ENST00000376568 AK9Q5TCS8 1911 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 EGFRP00533 1210 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 CNGA1P29973 690 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 SYKP43405 635 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 CYP4A11Q02928 519 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 CCDC178Q5BJE1 867 aa15.45■□□□□ 0.06
DDR1-225ENST00000376568 COL14A1Q05707 1796 aaKnown RBP15.45■□□□□ 0.06
DDR1-225ENST00000376568 COBLO75128 1261 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 HOXA10P31260 410 aaPredicted RBP15.44■□□□□ 0.06
DDR1-225ENST00000376568 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
DDR1-225ENST00000376568 TOPAZ1Q8N9V7 1692 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 WNT10BO00744 389 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 MRPL12P52815 198 aaKnown RBP15.44■□□□□ 0.06
DDR1-225ENST00000376568 TMEM266Q2M3C6 531 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 TSPY26PQ9H489 355 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 BMP3P12645 472 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 GNA11P29992 359 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 MTMR2Q13614 643 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 MAP3K11Q16584 847 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 PRR16Q569H4 304 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 GOPCQ9HD26 462 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 TBC1D7Q9P0N9 293 aa15.44■□□□□ 0.06
DDR1-225ENST00000376568 SERPINC1P01008 464 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 SH2D4AQ9H788 454 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 MRVI1Q9Y6F6 885 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 PFKFB2O60825 505 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 REXO1Q8N1G1 1221 aaKnown RBP15.43■□□□□ 0.06
DDR1-225ENST00000376568 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDR1-225ENST00000376568 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 RIOK1Q9BRS2 568 aaKnown RBP15.43■□□□□ 0.06
DDR1-225ENST00000376568 CEP131Q9UPN4 1083 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 DHX36Q9H2U1 1008 aaKnown RBP15.43■□□□□ 0.06
DDR1-225ENST00000376568 MTMR6Q9Y217 621 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 YDJCA8MPS7 323 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 ZBED4O75132 1171 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 SCG2P13521 617 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 FBXO11Q86XK2 927 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 OXER1Q8TDS5 423 aa15.43■□□□□ 0.06
DDR1-225ENST00000376568 ANKRD26Q9UPS8 1709 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 NRDCO43847 1150 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 EIF2AK2P19525 551 aaKnown RBP15.42■□□□□ 0.06
DDR1-225ENST00000376568 ANTXR2P58335 489 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 DACT2Q5SW24 774 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 NCAPH2Q6IBW4 605 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 CPLX3Q8WVH0 158 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 RBM28Q9NW13 759 aaKnown RBP15.42■□□□□ 0.06
DDR1-225ENST00000376568 ADCY7P51828 1080 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 FMR1Q06787 632 aaKnown RBP eCLIP15.42■□□□□ 0.063e-7■■■□□ 15.5
DDR1-225ENST00000376568 FOXP4Q8IVH2 680 aaPredicted RBP15.42■□□□□ 0.06
DDR1-225ENST00000376568 MB21D2Q8IYB1 491 aaPredicted RBP15.42■□□□□ 0.06
DDR1-225ENST00000376568 CLIC4Q9Y696 253 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 CCDC192P0DO97 292 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 DYMQ7RTS9 669 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 MYO9BQ13459 2157 aa15.42■□□□□ 0.06
DDR1-225ENST00000376568 CRY2Q49AN0 593 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 TRPM4Q8TD43 1214 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 GJA10Q969M2 543 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 ZNF274Q96GC6 653 aaPredicted RBP15.41■□□□□ 0.06
DDR1-225ENST00000376568 SH2D3AQ9BRG2 576 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 RTFDC1Q9BY42 306 aaPredicted RBP15.41■□□□□ 0.06
DDR1-225ENST00000376568 LY9Q9HBG7 655 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 SALL3Q9BXA9 1300 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 FAM205CA6NFA0 338 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 TECP42680 631 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 ZSCAN16Q9H4T2 348 aaPredicted RBP15.41■□□□□ 0.06
DDR1-225ENST00000376568 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.41■□□□□ 0.068e-8■■■■□ 25.6
DDR1-225ENST00000376568 GPR75-ASB3A0A0A6YYF3 556 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 CELF2O95319 508 aaKnown RBP15.41■□□□□ 0.06
DDR1-225ENST00000376568 ASNSP08243 561 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 TMEM260Q9NX78 707 aa15.41■□□□□ 0.06
DDR1-225ENST00000376568 POLR2DO15514 142 aaKnown RBP15.4■□□□□ 0.06
DDR1-225ENST00000376568 HARSP12081 509 aaKnown RBP15.4■□□□□ 0.06
DDR1-225ENST00000376568 RASA1P20936 1047 aa15.4■□□□□ 0.06
DDR1-225ENST00000376568 STAT6P42226 847 aa15.4■□□□□ 0.06
DDR1-225ENST00000376568 TTC38Q5R3I4 469 aa15.4■□□□□ 0.06
DDR1-225ENST00000376568 CHURC1Q8WUH1 139 aa15.4■□□□□ 0.06
DDR1-225ENST00000376568 HOOK2Q96ED9 719 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms