RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 HPS5Q9UPZ3 1129 aa26.77■■□□□ 1.88
HLA-C-202ENST00000376237 LARGE1O95461 756 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 STK3Q13188 491 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 CUL4AQ13619 759 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 LRRC47Q8N1G4 583 aaKnown RBP26.76■■□□□ 1.87
HLA-C-202ENST00000376237 FANCBQ8NB91 859 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 NUP133Q8WUM0 1156 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 GTF3C6Q969F1 213 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 SNCAIPQ9Y6H5 919 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 NID2Q14112 1375 aa26.76■■□□□ 1.87
HLA-C-202ENST00000376237 GOLGA8AA7E2F4 631 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 GMCL1P1Q8NEA9 526 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 CTCFLQ8NI51 663 aaPredicted RBP26.75■■□□□ 1.87
HLA-C-202ENST00000376237 MYL10Q9BUA6 226 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 DOCK1Q14185 1865 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 A0A1W2PRG0 241 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 KIF5BP33176 963 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 MOB2Q70IA6 237 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 IPO9Q96P70 1041 aaKnown RBP26.75■■□□□ 1.87
HLA-C-202ENST00000376237 GOPCQ9HD26 462 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 RBM28Q9NW13 759 aaKnown RBP26.75■■□□□ 1.87
HLA-C-202ENST00000376237 ZHX2Q9Y6X8 837 aa26.75■■□□□ 1.87
HLA-C-202ENST00000376237 PAPPA2Q9BXP8 1791 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 PASKQ96RG2 1323 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 UBE2Q2LH0YL09 131 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 CCT2P78371 535 aaKnown RBP26.74■■□□□ 1.87
HLA-C-202ENST00000376237 SCRN1Q12765 414 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 RTN1Q16799 776 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 ERO1BQ86YB8 467 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 ZNF280CQ8ND82 737 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 ACER1Q8TDN7 264 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 INTS4Q96HW7 963 aaKnown RBP26.74■■□□□ 1.87
HLA-C-202ENST00000376237 KIAA1683Q9H0B3 1180 aa26.74■■□□□ 1.87
HLA-C-202ENST00000376237 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-202ENST00000376237 USP17L10C9JJH3 530 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 F5H6K3 240 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 HSP90AA1P07900 732 aaKnown RBP26.73■■□□□ 1.87
HLA-C-202ENST00000376237 SNHG28P0DPA3 235 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 PPATQ06203 517 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 KLRC3Q07444 240 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 FSTL1Q12841 308 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 CST9Q5W186 159 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 CPLX2Q6PUV4 134 aaKnown RBP26.73■■□□□ 1.87
HLA-C-202ENST00000376237 NECAB1Q8N987 351 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 FEZ1Q99689 392 aa26.73■■□□□ 1.87
HLA-C-202ENST00000376237 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.73■■□□□ 1.87
HLA-C-202ENST00000376237 ATAD5Q96QE3 1844 aa26.72■■□□□ 1.87
HLA-C-202ENST00000376237 PDHBP11177 359 aa26.72■■□□□ 1.87
HLA-C-202ENST00000376237 RXRAP19793 462 aa26.72■■□□□ 1.87
HLA-C-202ENST00000376237 ECE1P42892 770 aa26.72■■□□□ 1.87
HLA-C-202ENST00000376237 GNAQP50148 359 aa26.72■■□□□ 1.87
HLA-C-202ENST00000376237 GRM4Q14833 912 aa26.72■■□□□ 1.87
HLA-C-202ENST00000376237 CCDC84Q86UT8 332 aaPredicted RBP26.72■■□□□ 1.87
HLA-C-202ENST00000376237 CCDC83Q8IWF9 413 aa26.72■■□□□ 1.87
HLA-C-202ENST00000376237 SPDYE5A6NIY4 337 aa26.71■■□□□ 1.87
HLA-C-202ENST00000376237 CPLX1O14810 134 aa26.71■■□□□ 1.87
HLA-C-202ENST00000376237 USP14P54578 494 aa26.71■■□□□ 1.87
HLA-C-202ENST00000376237 RAB11FIP4Q86YS3 637 aa26.71■■□□□ 1.87
HLA-C-202ENST00000376237 DCAF4Q8WV16 495 aa26.71■■□□□ 1.87
HLA-C-202ENST00000376237 GMCL1Q96IK5 515 aa26.71■■□□□ 1.87
HLA-C-202ENST00000376237 LLPHQ9BRT6 129 aaKnown RBP26.71■■□□□ 1.87
HLA-C-202ENST00000376237 VCPKMTQ9H867 229 aa26.71■■□□□ 1.87
HLA-C-202ENST00000376237 C19orf81C9J6K1 198 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 PARP1P09874 1014 aaKnown RBP26.7■■□□□ 1.87
HLA-C-202ENST00000376237 BACE1P56817 501 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 SPP2Q13103 211 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 ASPRV1Q53RT3 343 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 GPATCH4Q5T3I0 446 aaKnown RBP26.7■■□□□ 1.87
HLA-C-202ENST00000376237 SLFN13Q68D06 897 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 CCDC144CPQ8IYA2 1237 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 SLC10A4Q96EP9 437 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 CLMNQ96JQ2 1002 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 ELP3Q9H9T3 547 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 NCOA5Q9HCD5 579 aaKnown RBP26.7■■□□□ 1.87
HLA-C-202ENST00000376237 FAM217BQ9NTX9 383 aaPredicted RBP26.7■■□□□ 1.87
HLA-C-202ENST00000376237 AFG3L2Q9Y4W6 797 aa26.7■■□□□ 1.87
HLA-C-202ENST00000376237 CDC27P30260 824 aa26.7■■□□□ 1.86
HLA-C-202ENST00000376237 ADD1P35611 737 aaKnown RBP26.7■■□□□ 1.86
HLA-C-202ENST00000376237 LPAR1Q92633 364 aa26.7■■□□□ 1.86
HLA-C-202ENST00000376237 LZTS2Q9BRK4 669 aa26.7■■□□□ 1.86
HLA-C-202ENST00000376237 MTMR7Q9Y216 660 aa26.7■■□□□ 1.86
HLA-C-202ENST00000376237 PALM3A6NDB9 673 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-202ENST00000376237 CDKL5O76039 1030 aa26.69■■□□□ 1.86
HLA-C-202ENST00000376237 NDUFB10O96000 172 aa26.69■■□□□ 1.86
HLA-C-202ENST00000376237 SLC1A4P43007 532 aa26.69■■□□□ 1.86
HLA-C-202ENST00000376237 ST3GAL1Q11201 340 aa26.69■■□□□ 1.86
HLA-C-202ENST00000376237 MAD2L2Q9UI95 211 aa26.69■■□□□ 1.86
HLA-C-202ENST00000376237 RAD21O60216 631 aa26.68■■□□□ 1.86
HLA-C-202ENST00000376237 USP17L2Q6R6M4 530 aa26.68■■□□□ 1.86
HLA-C-202ENST00000376237 MYH4Q9Y623 1939 aa26.67■■□□□ 1.86
HLA-C-202ENST00000376237 CXCL11O14625 94 aa26.67■■□□□ 1.86
HLA-C-202ENST00000376237 ZNF543Q08ER8 600 aa26.67■■□□□ 1.86
HLA-C-202ENST00000376237 PPIL2Q13356 520 aa26.67■■□□□ 1.86
HLA-C-202ENST00000376237 MTMR2Q13614 643 aa26.67■■□□□ 1.86
HLA-C-202ENST00000376237 OTOFQ9HC10 1997 aa26.66■■□□□ 1.86
HLA-C-202ENST00000376237 TRIM75PA6NK02 468 aa26.66■■□□□ 1.86
HLA-C-202ENST00000376237 IFNAR1P17181 557 aa26.66■■□□□ 1.86
HLA-C-202ENST00000376237 SMARCA1P28370 1054 aa26.66■■□□□ 1.86
HLA-C-202ENST00000376237 NTRK3Q16288 839 aa26.66■■□□□ 1.86
HLA-C-202ENST00000376237 SH3D19Q5HYK7 790 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms