RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MOV10L1Q9BXT6 1211 aaKnown RBP11.25□□□□□ -0.61
PTCH1-204ENST00000375290 FOXP1Q9H334 677 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-204ENST00000375290 SPOPO43791 374 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 ATP2C2O75185 946 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 NOSTRINQ8IVI9 506 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 MTA3Q9BTC8 594 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 ATP10AO60312 1499 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 POLR2DO15514 142 aaKnown RBP11.25□□□□□ -0.61
PTCH1-204ENST00000375290 KLHL30Q0D2K2 578 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 C3orf20Q8ND61 904 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 PPP4R1Q8TF05 950 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 IPO5O00410 1097 aaKnown RBP11.25□□□□□ -0.61
PTCH1-204ENST00000375290 SND1Q7KZF4 910 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCH1-204ENST00000375290 TADA2BQ86TJ2 420 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 GPT2Q8TD30 523 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 CCDC188H7C350 402 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 TPD52P55327 224 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-204ENST00000375290 ARHGAP4P98171 946 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 ITIH3Q06033 890 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 CENPKQ9BS16 269 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-204ENST00000375290 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 EPS15L1Q9UBC2 864 aa11.25□□□□□ -0.61
PTCH1-204ENST00000375290 WDR19Q8NEZ3 1342 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 BAIAP2L1Q9UHR4 511 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 TPCN1Q9ULQ1 816 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 CTNND2Q9UQB3 1225 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 PDE4DQ08499 809 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 SLC8A3P57103 927 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 NCBP1Q09161 790 aaKnown RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 ORC2Q13416 577 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 DHTKD1Q96HY7 919 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 YY1AP1Q9H869 796 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 TRAF5O00463 557 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 XRCC5P13010 732 aaKnown RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 RPUSD2Q8IZ73 545 aaKnown RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 GTPBP6O43824 516 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 EPN1Q9Y6I3 576 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 MKRN3Q13064 507 aaKnown RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 MAST3O60307 1309 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 IDI1Q13907 227 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 CFAP73A6NFT4 308 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 TNFAIP3P21580 790 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 KIF11P52732 1056 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 TTC38Q5R3I4 469 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
PTCH1-204ENST00000375290 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-204ENST00000375290 TLDC2A0PJX2 215 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 ISM2Q6H9L7 571 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 EYA2O00167 538 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 MTMR6Q9Y217 621 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 KCNJ18B7U540 433 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 KCNJ12Q14500 433 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 DCTN3O75935 186 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 HEATR3Q7Z4Q2 680 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 CCDC144CPQ8IYA2 1237 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 ANKRD27Q96NW4 1050 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 ADCY9O60503 1353 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 KDRP35968 1356 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 MED23Q9ULK4 1368 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 IGSF3O75054 1194 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 STAT1P42224 750 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 SLC39A14Q15043 492 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 VWA3AA6NCI4 1184 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 DIS3L2Q8IYB7 885 aaKnown RBP11.23□□□□□ -0.61
PTCH1-204ENST00000375290 METTL22Q9BUU2 404 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-204ENST00000375290 RIC8AQ9NPQ8 531 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 AMOTL2Q9Y2J4 779 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 ABCC12Q96J65 1359 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
PTCH1-204ENST00000375290 TTC6Q86TZ1 520 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 TRIM6Q9C030 488 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-204ENST00000375290 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 MCM7P33993 719 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 CDC37Q16543 378 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-204ENST00000375290 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 ANKRD35Q8N283 1001 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 PLBD2Q8NHP8 589 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 TMX1Q9H3N1 280 aa11.23□□□□□ -0.61
PTCH1-204ENST00000375290 MIER3Q7Z3K6 550 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 RPGRQ92834 1020 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ZMAT2Q96NC0 199 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ALDH8A1Q9H2A2 487 aaPredicted RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 MIS18AQ9NYP9 233 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 ZMYM6O95789 1325 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 MTX1Q13505 466 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 NELFBQ8WX92 580 aa11.22□□□□□ -0.61
PTCH1-204ENST00000375290 NOP53Q9NZM5 478 aaKnown RBP11.22□□□□□ -0.61
PTCH1-204ENST00000375290 COMMD10Q9Y6G5 202 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms