RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 IL15P40933 162 aaPredicted RBP11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 KCNQ1P51787 676 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 WDR63Q8IWG1 891 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 ABRAQ8N0Z2 381 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 FEZ1Q99689 392 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 HOXC10Q9NYD6 342 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 BTBD7Q9P203 1132 aa11.58□□□□□ -0.56
HLA-DOA-202ENST00000374813 GDF11O95390 407 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 JAG1P78504 1218 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 PRAMEF19Q5SWL8 479 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 ZNF365Q70YC5 407 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 MICALL1Q8N3F8 863 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 SHCBP1Q8NEM2 672 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 USP44Q9H0E7 712 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 STARD7Q9NQZ5 370 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 ZNF521Q96K83 1311 aa11.57□□□□□ -0.56
HLA-DOA-202ENST00000374813 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 PRR33A8MZF0 331 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 PI4K2BG5E9Z4 385 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 GTPBP6O43824 516 aaPredicted RBP11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 TLL1O43897 1013 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 POU3F3P20264 500 aaPredicted RBP11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 ZYXQ15942 572 aaKnown RBP11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 ZNF384Q8TF68 577 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 KIAA1683Q9H0B3 1180 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 SIL1Q9H173 461 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 NKX2-4Q9H2Z4 354 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 MROH8Q9H579 483 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 C11orf16Q9NQ32 467 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 RAI14Q9P0K7 980 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 TBX21Q9UL17 535 aa11.56□□□□□ -0.56
HLA-DOA-202ENST00000374813 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 COBLO75128 1261 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 PGK1P00558 417 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 GH2P01242 217 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 HLA-DOAP06340 250 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 CSF2RAP15509 400 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 VCAM1P19320 739 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 ERCC3P19447 782 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 ADORA1P30542 326 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 ACLYP53396 1101 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 TIMM10P62072 90 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 COG2Q14746 738 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 MVPQ14764 893 aaKnown RBP11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 MB21D1Q8N884 522 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 SH3RF3Q8TEJ3 882 aaPredicted RBP11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 MAML3Q96JK9 1138 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 SPATC1LQ9H0A9 340 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 KCNH6Q9H252 994 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 PRKRIP1Q9H875 184 aaPredicted RBP11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 AKAP2Q9Y2D5 859 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 ELP1O95163 1332 aa11.55□□□□□ -0.56
HLA-DOA-202ENST00000374813 ZNFX1Q9P2E3 1918 aaKnown RBP11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 USP34Q70CQ2 3546 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 ZNF236Q9UL36 1845 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 APBB1O00213 710 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 FGBP02675 491 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 PPP2R2DQ66LE6 453 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 TGFBRAP1Q8WUH2 860 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 HLA-CQ95604 372 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 GLT1D1Q96MS3 346 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 IL23AQ9NPF7 189 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 PALD1Q9ULE6 856 aa11.54□□□□□ -0.56
HLA-DOA-202ENST00000374813 FAM86C2PA6NEL3 165 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 ACRP10323 421 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 FCER1AP12319 257 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 AKR1A1P14550 325 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 PPP4CP60510 307 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 RAB3GAP1Q15042 981 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 SPATA5Q8NB90 893 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 XAGE2Q96GT9 111 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 RPAP3Q9H6T3 665 aaPredicted RBP11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 CABP5Q9NP86 173 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 LRP2BPQ9P2M1 347 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 HDAC5Q9UQL6 1122 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 PCDHA11Q9Y5I1 949 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 CACNA1AO00555 2505 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 CFAP54Q96N23 3096 aa11.53□□□□□ -0.56
HLA-DOA-202ENST00000374813 TLR3O15455 904 aaKnown RBP11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 ADAMTS4O75173 837 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 CDK7P50613 346 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 KCNA10Q16322 511 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 SHROOM1Q2M3G4 852 aaPredicted RBP11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 TATDN1Q6P1N9 297 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 NCAPG2Q86XI2 1143 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 TINF2Q9BSI4 451 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 AATFQ9NY61 560 aaKnown RBP eCLIP11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 HMG20BQ9P0W2 317 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 YBX2Q9Y2T7 364 aaKnown RBP11.52□□□□□ -0.57
HLA-DOA-202ENST00000374813 MTCH2Q9Y6C9 303 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms