RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 FAM217BQ9NTX9 383 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 GGA3Q9NZ52 723 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 NYAP2Q9P242 653 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 RBM27Q9P2N5 1060 aaKnown RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 ORC3Q9UBD5 711 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-202ENST00000374339 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 SYNPO2Q9UMS6 1093 aa11.28□□□□□ -0.6
PTPN20-202ENST00000374339 MYH6P13533 1939 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 VPS37CA5D8V6 355 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-202ENST00000374339 FAM196BA6NMK8 535 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 H3BQV1 296 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 FMNL1O95466 1100 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-202ENST00000374339 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
PTPN20-202ENST00000374339 GRM4Q14833 912 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
PTPN20-202ENST00000374339 DCPSQ96C86 337 aaKnown RBP11.27□□□□□ -0.61
PTPN20-202ENST00000374339 TEPSINQ96N21 525 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 RNF26Q9BY78 433 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-202ENST00000374339 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 GINM1Q9NU53 330 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.61
PTPN20-202ENST00000374339 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 ATAD5Q96QE3 1844 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 DEXIO95424 95 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
PTPN20-202ENST00000374339 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 ICA1Q05084 483 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 PKP1Q13835 747 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 TRIM29Q14134 588 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 CLEC17AQ6ZS10 378 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 TMTC3Q6ZXV5 915 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
PTPN20-202ENST00000374339 MKL1Q969V6 931 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 ZDHHC9Q9Y397 364 aa11.26□□□□□ -0.61
PTPN20-202ENST00000374339 ASTN2O75129 1339 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-202ENST00000374339 CTNND1O60716 968 aaKnown RBP11.25□□□□□ -0.61
PTPN20-202ENST00000374339 GDF11O95390 407 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 GH2P01242 217 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 ASNSP08243 561 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
PTPN20-202ENST00000374339 XBP1P17861 261 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 SMARCA1P28370 1054 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 CAP2P40123 477 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-202ENST00000374339 SEPT2Q15019 361 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 SUPT20HL1Q3ZLR7 823 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-202ENST00000374339 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 PHKBQ93100 1093 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 C8orf76Q96K31 380 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 SH2D4AQ9H788 454 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 MTMR6Q9Y217 621 aa11.25□□□□□ -0.61
PTPN20-202ENST00000374339 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
PTPN20-202ENST00000374339 GOLGA6L22H0YM25 854 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 PRPF3O43395 683 aaKnown RBP11.24□□□□□ -0.61
PTPN20-202ENST00000374339 F13A1P00488 732 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
PTPN20-202ENST00000374339 PTMSP20962 102 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 EPHX2P34913 555 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 GPATCH4Q5T3I0 446 aaKnown RBP11.24□□□□□ -0.61
PTPN20-202ENST00000374339 NBPF11Q86T75 865 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 ALG1Q9BT22 464 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 ZNF341Q9BYN7 854 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 ZSCAN16Q9H4T2 348 aaPredicted RBP11.24□□□□□ -0.61
PTPN20-202ENST00000374339 MAD2L2Q9UI95 211 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 ZBTB21Q9ULJ3 1066 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 DOCK1Q14185 1865 aa11.24□□□□□ -0.61
PTPN20-202ENST00000374339 DDX11L8A8MPP1 907 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 KLRF2D3W0D1 207 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 SLURP2P0DP57 97 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 PDHBP11177 359 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 FUT2Q10981 343 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-202ENST00000374339 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 FAM177A1Q8N128 213 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-202ENST00000374339 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
PTPN20-202ENST00000374339 CCDC82Q8N4S0 544 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 GMCL1P1Q8NEA9 526 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 FBXO18Q8NFZ0 1043 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 DCAF4Q8WV16 495 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 SPZ1Q9BXG8 430 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
PTPN20-202ENST00000374339 CNTNAP5Q8WYK1 1306 aa11.22□□□□□ -0.61
PTPN20-202ENST00000374339 DTNBO60941 627 aa11.22□□□□□ -0.61
PTPN20-202ENST00000374339 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
PTPN20-202ENST00000374339 GUCY1A2P33402 732 aa11.22□□□□□ -0.61
PTPN20-202ENST00000374339 ZNF543Q08ER8 600 aa11.22□□□□□ -0.61
PTPN20-202ENST00000374339 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
PTPN20-202ENST00000374339 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
PTPN20-202ENST00000374339 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms