RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ERFEQ4G0M1 354 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 BRAPQ7Z569 592 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 PRPF31Q8WWY3 499 aaKnown RBP15.88■□□□□ 0.13
TRAF1-201ENST00000373887 NAPGQ99747 312 aaPredicted RBP15.88■□□□□ 0.13
TRAF1-201ENST00000373887 VPS54Q9P1Q0 977 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 SH2D4BQ5SQS7 431 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 B4GALNT4Q76KP1 1039 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 PSMB7Q99436 277 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 A0A1B0GUA9 196 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 RPL13P26373 211 aaKnown RBP15.88■□□□□ 0.13
TRAF1-201ENST00000373887 TRPC3Q13507 836 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 DIXDC1Q155Q3 683 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 ARHGEF16Q5VV41 709 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 CASC4Q6P4E1 433 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 GLG1Q92896 1179 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 BABAM1Q9NWV8 329 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 GOLGA6CA6NDK9 693 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 GOLGA6DP0CG33 693 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 HHATQ5VTY9 493 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 KLHL7Q8IXQ5 586 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 SEPT12Q8IYM1 358 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 ZBTB38Q8NAP3 1195 aaPredicted RBP15.88■□□□□ 0.13
TRAF1-201ENST00000373887 GOLGA6AQ9NYA3 693 aa15.88■□□□□ 0.13
TRAF1-201ENST00000373887 SERPINB2P05120 415 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 VSIG1Q86XK7 387 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 MGARPQ8TDB4 240 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 NEO1Q92859 1461 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 ATP2B4P23634 1241 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 INPP5BP32019 993 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 RSPH3Q86UC2 560 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 SNX29Q8TEQ0 813 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 SRP68Q9UHB9 627 aaKnown RBP15.87■□□□□ 0.13
TRAF1-201ENST00000373887 RABGAP1Q9Y3P9 1069 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRAF1-201ENST00000373887 MLH3Q9UHC1 1453 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 M0QZ92 97 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 RFX1P22670 979 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 KIF22Q14807 665 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 PNMA8AQ86V59 439 aaPredicted RBP15.87■□□□□ 0.13
TRAF1-201ENST00000373887 NAP1L4Q99733 375 aaKnown RBP15.87■□□□□ 0.13
TRAF1-201ENST00000373887 ANO3Q9BYT9 981 aa15.87■□□□□ 0.13
TRAF1-201ENST00000373887 RAD17O75943 681 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 TPH2Q8IWU9 490 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 DIS3L2Q8IYB7 885 aaKnown RBP15.86■□□□□ 0.13
TRAF1-201ENST00000373887 NLGN1Q8N2Q7 840 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 MYCT1Q8N699 235 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 AS3MTQ9HBK9 375 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 ASIC3Q9UHC3 531 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 ARHGEF12Q9NZN5 1544 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 CETN3O15182 167 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 TTC38Q5R3I4 469 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
TRAF1-201ENST00000373887 PUS3Q9BZE2 481 aaKnown RBP15.86■□□□□ 0.13
TRAF1-201ENST00000373887 MYO5CQ9NQX4 1742 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 TNFAIP1Q13829 316 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 NELFCDQ8IXH7 590 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 AFAP1L2Q8N4X5 818 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 STAMQ92783 540 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 STK10O94804 968 aaKnown RBP15.86■□□□□ 0.13
TRAF1-201ENST00000373887 SLC8A3P57103 927 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 TBC1D8BQ0IIM8 1120 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 CALCRLQ16602 461 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 WHAMMQ8TF30 809 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 MLXIPQ9HAP2 919 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 SEC31BQ9NQW1 1179 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 ACTN4O43707 911 aaKnown RBP15.86■□□□□ 0.13
TRAF1-201ENST00000373887 TUBB4BP68371 445 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 CERKLQ49MI3 558 aaPredicted RBP15.86■□□□□ 0.13
TRAF1-201ENST00000373887 LIN9Q5TKA1 542 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 GSDMBQ8TAX9 411 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 STK38LQ9Y2H1 464 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 MAP3K15Q6ZN16 1313 aa15.86■□□□□ 0.13
TRAF1-201ENST00000373887 MYL5Q02045 173 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 BIRC2Q13490 618 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 MAP7Q14244 749 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 TSNAXIP1Q2TAA8 658 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 HAUS3Q68CZ6 603 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 EFCAB6Q5THR3 1501 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 POLR2DO15514 142 aaKnown RBP15.85■□□□□ 0.13
TRAF1-201ENST00000373887 UBL4BQ8N7F7 174 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 TRPC6Q9Y210 931 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 CFAP74Q9C0B2 1584 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 NONOQ15233 471 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRAF1-201ENST00000373887 SMC5Q8IY18 1101 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 NACA2Q9H009 215 aa15.85■□□□□ 0.13
TRAF1-201ENST00000373887 PTPRTO14522 1441 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 KSR1Q8IVT5 923 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.84■□□□□ 0.13
TRAF1-201ENST00000373887 I3L4J1 428 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 ADORA1P30542 326 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 IGBP1P78318 339 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 RDH13Q8NBN7 331 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 ZNF804BA4D1E1 1349 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 ELP1O95163 1332 aa15.84■□□□□ 0.13
TRAF1-201ENST00000373887 CYP26C1Q6V0L0 522 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms