RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 MIGA1Q8NAN2 632 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 VPS16Q9H269 839 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 ENC1O14682 589 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 BCAMP50895 628 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 RTN1Q16799 776 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 CNGA4Q8IV77 575 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 WASF1Q92558 559 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 PAGE5Q96GU1 130 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
COL9A2-202ENST00000372748 FOXP1Q9H334 677 aaPredicted RBP16.75■□□□□ 0.27
COL9A2-202ENST00000372748 CTNND2Q9UQB3 1225 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 FGFR2P21802 821 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 MAP3K12Q12852 859 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 CDKAL1Q5VV42 579 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 SUSD4Q5VX71 490 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 TTF2Q9UNY4 1162 aaKnown RBP16.75■□□□□ 0.27
COL9A2-202ENST00000372748 TFR2Q9UP52 801 aa16.75■□□□□ 0.27
COL9A2-202ENST00000372748 N4BP3O15049 544 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 ARHGAP25P42331 645 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 LIFRP42702 1097 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 LCORLQ8N3X6 602 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 ZNF579Q8NAF0 562 aaKnown RBP16.74■□□□□ 0.27
COL9A2-202ENST00000372748 HDAC6Q9UBN7 1215 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 GUCA1BQ9UMX6 200 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 STK36Q9NRP7 1315 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 DDX60Q8IY21 1712 aaKnown RBP16.74■□□□□ 0.27
COL9A2-202ENST00000372748 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 ATRNO75882 1429 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 SLC5A1P13866 664 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 TDO2P48775 406 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 EARS2Q5JPH6 523 aaKnown RBP16.74■□□□□ 0.27
COL9A2-202ENST00000372748 LRRC31Q6UY01 552 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 SYMPKQ92797 1274 aaKnown RBP16.74■□□□□ 0.27
COL9A2-202ENST00000372748 BLZF1Q9H2G9 400 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 ABHD10Q9NUJ1 306 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 MYO6Q9UM54 1294 aa16.74■□□□□ 0.27
COL9A2-202ENST00000372748 PPP1R3GB7ZBB8 358 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 FAM71BQ8TC56 605 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 SLC4A4Q9Y6R1 1079 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 WNT7AO00755 349 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 ZMYND10O75800 440 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
COL9A2-202ENST00000372748 KRT31Q15323 416 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 WHAMMP3Q1A5X7 153 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
COL9A2-202ENST00000372748 CTAGE1Q96RT6 745 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 CHP1Q99653 195 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 TAB2Q9NYJ8 693 aa16.73■□□□□ 0.27
COL9A2-202ENST00000372748 ITGB4P16144 1822 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 MROH5Q6ZUA9 1318 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 EIF3CLB5ME19 914 aaKnown RBP16.72■□□□□ 0.27
COL9A2-202ENST00000372748 SMIM22K7EJ46 135 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 ZNF34Q8IZ26 560 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 CRACR2BQ8N4Y2 399 aaPredicted RBP16.72■□□□□ 0.27
COL9A2-202ENST00000372748 EIF3CQ99613 913 aaKnown RBP16.72■□□□□ 0.27
COL9A2-202ENST00000372748 VPS54Q9P1Q0 977 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 MAPK8IP1Q9UQF2 711 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 MYH3P11055 1940 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.72■□□□□ 0.27
COL9A2-202ENST00000372748 SRGAP2O75044 1071 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 RNF40O75150 1001 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 TMTC1Q8IUR5 882 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 SHISA4Q96DD7 197 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 HINFPQ9BQA5 517 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 ECM29Q5VYK3 1845 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 BCL9O00512 1426 aa16.72■□□□□ 0.27
COL9A2-202ENST00000372748 PRDM1O75626 825 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 DEXIO95424 95 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 KRT9P35527 623 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 WTAPQ15007 396 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 GBP3Q9H0R5 595 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 NUP98P52948 1817 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 EXOC5O00471 708 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 AMPD2Q01433 879 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
COL9A2-202ENST00000372748 PACS2Q86VP3 889 aa16.71■□□□□ 0.27
COL9A2-202ENST00000372748 TRIM75PA6NK02 468 aa16.71■□□□□ 0.26
COL9A2-202ENST00000372748 IL6STP40189 918 aaPredicted RBP16.71■□□□□ 0.26
COL9A2-202ENST00000372748 TUBB2AQ13885 445 aa16.71■□□□□ 0.26
COL9A2-202ENST00000372748 ALX1Q15699 326 aa16.71■□□□□ 0.26
COL9A2-202ENST00000372748 CAPZA3Q96KX2 299 aa16.71■□□□□ 0.26
COL9A2-202ENST00000372748 TUBB2BQ9BVA1 445 aa16.71■□□□□ 0.26
COL9A2-202ENST00000372748 EFCC1Q9HA90 598 aa16.71■□□□□ 0.26
COL9A2-202ENST00000372748 LRP2BPQ9P2M1 347 aa16.71■□□□□ 0.26
COL9A2-202ENST00000372748 WTIPA6NIX2 430 aaPredicted RBP16.7■□□□□ 0.26
COL9A2-202ENST00000372748 MINDY4BA8MYZ0 360 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 CYP26C1Q6V0L0 522 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 GSPT2Q8IYD1 628 aaKnown RBP16.7■□□□□ 0.26
COL9A2-202ENST00000372748 CCDC148Q8NFR7 591 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 ERVV-1B6SEH8 477 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 ZNF174Q15697 407 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 RRAGBQ5VZM2 374 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 GOLGA6L1Q8N7Z2 621 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 SDR42E1Q8WUS8 393 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 ACSBG1Q96GR2 724 aa16.7■□□□□ 0.26
COL9A2-202ENST00000372748 AATFQ9NY61 560 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL9A2-202ENST00000372748 SLIT2O94813 1529 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms