RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 HAUS7Q99871 368 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 PFDN1O60925 122 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 STRN3Q13033 797 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 MIER3Q7Z3K6 550 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 ADGRB3O60242 1522 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 KDM2BQ8NHM5 1336 aa14.81□□□□□ -0.04
RAPGEF1-201ENST00000372189 ARHGEF35A5YM69 484 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 MXRA7P84157 204 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 PRAMEF22A3QJZ6 481 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 CFAP58Q5T655 872 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 B4GALNT4Q76KP1 1039 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 LCA5Q86VQ0 697 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 NEK11Q8NG66 645 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 TTC38Q5R3I4 469 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 SRP68Q9UHB9 627 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 ATP10DQ9P241 1426 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 HARSP12081 509 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 DIXDC1Q155Q3 683 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 MSANTD4Q8NCY6 345 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 EDC3Q96F86 508 aaKnown RBP14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 ZSCAN10Q96SZ4 725 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 SAMD15Q9P1V8 674 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 CLTCL1P53675 1640 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 SETDB1Q15047 1291 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 SDR42E1Q8WUS8 393 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 EAF2Q96CJ1 260 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 LRRC45Q96CN5 670 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 CLSTN2Q9H4D0 955 aa14.8□□□□□ -0.04
RAPGEF1-201ENST00000372189 NPR1P16066 1061 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 DIS3L2Q8IYB7 885 aaKnown RBP14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 CERKQ8TCT0 537 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 IFT81Q8WYA0 676 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 FNBP1Q96RU3 617 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 RNF123Q5XPI4 1314 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 ALKQ9UM73 1620 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 ZNF75DP51815 510 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 EXOC7Q9UPT5 735 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 GFAPP14136 432 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 NLRX1Q86UT6 975 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 NLRP10Q86W26 655 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 STX17P56962 302 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 KCTD17Q8N5Z5 321 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 RGS22Q8NE09 1264 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 PUS3Q9BZE2 481 aaKnown RBP14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 SPC25Q9HBM1 224 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 IMPACTQ9P2X3 320 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 PPP1R2P41236 205 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 CDAN1Q8IWY9 1227 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 FNBP4Q8N3X1 1017 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 DBNDD1Q9H9R9 158 aa14.79□□□□□ -0.04
RAPGEF1-201ENST00000372189 M0QZ92 97 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 ATP2A1O14983 1001 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 PHKA1P46020 1223 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 DNM2P50570 870 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 TRIM14Q14142 442 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 NAPGQ99747 312 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 COPRSQ9NQ92 184 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 SEC31BQ9NQW1 1179 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 EPB41P11171 864 aaKnown RBP14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 KCNA4P22459 653 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 ANO1Q5XXA6 986 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 LMNTD2Q8IXW0 634 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 PHKBQ93100 1093 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 ABCA9Q8IUA7 1624 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 A6NNZ2 444 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 CALCRLQ16602 461 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 TUBB8Q3ZCM7 444 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 SESN3P58005 492 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 ICA1Q05084 483 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 CCDC122Q5T0U0 273 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 OTUD7BQ6GQQ9 843 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 MTRF1LQ9UGC7 380 aaKnown RBP14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 RPS6KA4O75676 772 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 ARID5AQ03989 594 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 DCAF17Q5H9S7 520 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 ARHGEF16Q5VV41 709 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 RTKN2Q8IZC4 609 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 GINS2Q9Y248 185 aa14.78□□□□□ -0.04
RAPGEF1-201ENST00000372189 WDR44Q5JSH3 913 aa14.77□□□□□ -0.04
RAPGEF1-201ENST00000372189 GPR108Q9NPR9 543 aa14.77□□□□□ -0.04
RAPGEF1-201ENST00000372189 COMMD10Q9Y6G5 202 aa14.77□□□□□ -0.04
RAPGEF1-201ENST00000372189 GRIPAP1Q4V328 841 aa14.77□□□□□ -0.04
RAPGEF1-201ENST00000372189 TRIM6Q9C030 488 aaPredicted RBP14.77□□□□□ -0.04
RAPGEF1-201ENST00000372189 FRMPD2Q68DX3 1309 aaPredicted RBP14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 CLRN2A0PK11 232 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 MMP10P09238 476 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 CC2D2BQ6DHV5 1058 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 CNNM4Q6P4Q7 775 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 PDE4DQ08499 809 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 BIRC3Q13489 604 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 ABCB5Q2M3G0 1257 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 POTEDQ86YR6 584 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 LRWD1Q9UFC0 647 aa14.77□□□□□ -0.05
RAPGEF1-201ENST00000372189 ZBTB16Q05516 673 aa14.76□□□□□ -0.05
RAPGEF1-201ENST00000372189 GNPTABQ3T906 1256 aa14.76□□□□□ -0.05
RAPGEF1-201ENST00000372189 REXO1Q8N1G1 1221 aaKnown RBP14.76□□□□□ -0.05
RAPGEF1-201ENST00000372189 RNF17Q9BXT8 1623 aaKnown RBP14.76□□□□□ -0.05
RAPGEF1-201ENST00000372189 OVOS2A0A0G2JMS6 1433 aa14.76□□□□□ -0.05
RAPGEF1-201ENST00000372189 OVOS2A0A0J9YW53 1432 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 1519.3 ms