RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 NOVP48745 357 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 TROAPQ12815 778 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 NFIAQ12857 509 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 TRIM29Q14134 588 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 TATDN1Q6P1N9 297 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 DYNLL2Q96FJ2 89 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 DDX19AQ9NUU7 478 aaKnown RBP14.99□□□□□ -0.01
LDB3-203ENST00000372056 POLR3EQ9NVU0 708 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 NMT2O60551 498 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 U2AF2P26368 475 aaKnown RBP eCLIP14.98□□□□□ -0.01
LDB3-203ENST00000372056 GUCY1A2P33402 732 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 KIF4BQ2VIQ3 1234 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 SLC4A8Q2Y0W8 1093 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 FAM47AQ5JRC9 791 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 FAM177A1Q8N128 213 aaPredicted RBP14.98□□□□□ -0.01
LDB3-203ENST00000372056 CTCFLQ8NI51 663 aaPredicted RBP14.98□□□□□ -0.01
LDB3-203ENST00000372056 FUCA2Q9BTY2 467 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 NUP62CLQ9H1M0 184 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 CABP5Q9NP86 173 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 PITPNM2Q9BZ72 1349 aa14.98□□□□□ -0.01
LDB3-203ENST00000372056 NR1I2O75469 434 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 DEXIO95424 95 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 YEATS4O95619 227 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 TOP1P11387 765 aaKnown RBP14.97□□□□□ -0.01
LDB3-203ENST00000372056 SMARCA1P28370 1054 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 FUT2Q10981 343 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 TCP10Q12799 353 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 CERKLQ49MI3 558 aaPredicted RBP14.97□□□□□ -0.01
LDB3-203ENST00000372056 CMTR1Q8N1G2 835 aaKnown RBP14.97□□□□□ -0.01
LDB3-203ENST00000372056 LINC00301Q8NCQ3 95 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 RNF26Q9BY78 433 aaPredicted RBP14.97□□□□□ -0.01
LDB3-203ENST00000372056 KANSL2Q9H9L4 492 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 YBX3P16989 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
LDB3-203ENST00000372056 ME1P48163 572 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 PRELPP51888 382 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 MAP3K10Q02779 954 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 C9orf131Q5VYM1 1079 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 TMEM179Q6ZVK1 233 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 KCNG4Q8TDN1 519 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 ANP32BQ92688 251 aaKnown RBP14.97□□□□□ -0.01
LDB3-203ENST00000372056 CLSTN2Q9H4D0 955 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 VEZTQ9HBM0 779 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 CLIC4Q9Y696 253 aa14.97□□□□□ -0.01
LDB3-203ENST00000372056 TTLL1O95922 423 aa14.96□□□□□ -0.01
LDB3-203ENST00000372056 RCSD1Q6JBY9 416 aa14.96□□□□□ -0.01
LDB3-203ENST00000372056 FAM43AQ8N2R8 423 aa14.96□□□□□ -0.01
LDB3-203ENST00000372056 CCDC82Q8N4S0 544 aa14.96□□□□□ -0.01
LDB3-203ENST00000372056 RNF214Q8ND24 703 aa14.96□□□□□ -0.01
LDB3-203ENST00000372056 PPP1R9BQ96SB3 815 aa14.96□□□□□ -0.01
LDB3-203ENST00000372056 ADARB2Q9NS39 739 aaKnown RBP14.96□□□□□ -0.01
LDB3-203ENST00000372056 ZNF541Q9H0D2 1346 aa14.96□□□□□ -0.01
LDB3-203ENST00000372056 MYH8P13535 1937 aa14.96□□□□□ -0.02
LDB3-203ENST00000372056 DDTLA6NHG4 134 aaPredicted RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 TCP10L2B9ZVM9 353 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 MMP1P03956 469 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 XBP1P17861 261 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 SHMT1P34896 483 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 CCDC173Q0VFZ6 552 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 MAP3K11Q16584 847 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 RBM26Q5T8P6 1007 aaKnown RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 DCAF15Q66K64 600 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 RBM43Q6ZSC3 357 aaKnown RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 L3MBTL3Q96JM7 780 aaPredicted RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.95□□□□□ -0.02
LDB3-203ENST00000372056 MTMR4Q9NYA4 1195 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 ADAMTSL1Q8N6G6 1762 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 PLEKHA8P1O95397 391 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 GNL2Q13823 731 aaKnown RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 STK38Q15208 465 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 CAMK4Q16566 473 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 ANO1Q5XXA6 986 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 TMTC3Q6ZXV5 915 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 PNMA1Q8ND90 353 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 ZC3H15Q8WU90 426 aaKnown RBP14.95□□□□□ -0.02
LDB3-203ENST00000372056 TNMDQ9H2S6 317 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 GOLPH3LQ9H4A5 285 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.95□□□□□ -0.02
LDB3-203ENST00000372056 IL17RBQ9NRM6 502 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 NYAP2Q9P242 653 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 PCDHA7Q9UN72 937 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 STX8Q9UNK0 236 aa14.95□□□□□ -0.02
LDB3-203ENST00000372056 IGKV6D-41A0A0C4DH26 115 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 A0A1W2PQ27 194 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 A0A1W2PQ64 194 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 A0A1W2PQD8 194 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 CLRN2A0PK11 232 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 IQCA1LA6NCM1 817 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 SPTLC2O15270 562 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 NBPF9Q3BBW0 867 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 ADALQ6DHV7 355 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 SLC44A5Q8NCS7 719 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 MKL1Q969V6 931 aa14.94□□□□□ -0.02
LDB3-203ENST00000372056 PRPF3O43395 683 aaKnown RBP14.93□□□□□ -0.02
LDB3-203ENST00000372056 CACNB3P54284 484 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms