RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ZNF827Q17R98 1081 aa33.01■■■□□ 2.88
SSBP3-204ENST00000371320 CCDC112Q8NEF3 446 aa33.01■■■□□ 2.88
SSBP3-204ENST00000371320 RPGRQ92834 1020 aaKnown RBP33.01■■■□□ 2.88
SSBP3-204ENST00000371320 DYNLL2Q96FJ2 89 aa33.01■■■□□ 2.88
SSBP3-204ENST00000371320 MKNK2Q9HBH9 465 aa33.01■■■□□ 2.88
SSBP3-204ENST00000371320 A0A087X0B3 334 aa33.01■■■□□ 2.87
SSBP3-204ENST00000371320 SLFN14P0C7P3 912 aa33.01■■■□□ 2.87
SSBP3-204ENST00000371320 IL17RBQ9NRM6 502 aa33.01■■■□□ 2.87
SSBP3-204ENST00000371320 GRIK5Q16478 980 aa33■■■□□ 2.87
SSBP3-204ENST00000371320 PRR5LQ6MZQ0 368 aa33■■■□□ 2.87
SSBP3-204ENST00000371320 VSTM4Q8IW00 320 aa33■■■□□ 2.87
SSBP3-204ENST00000371320 ENOX1Q8TC92 643 aaKnown RBP33■■■□□ 2.87
SSBP3-204ENST00000371320 GJD4Q96KN9 370 aaPredicted RBP33■■■□□ 2.87
SSBP3-204ENST00000371320 GPR101Q96P66 508 aaPredicted RBP33■■■□□ 2.87
SSBP3-204ENST00000371320 LDHCP07864 332 aa33■■■□□ 2.87
SSBP3-204ENST00000371320 PPP4CP60510 307 aa33■■■□□ 2.87
SSBP3-204ENST00000371320 FMR1Q06787 632 aaKnown RBP eCLIP33■■■□□ 2.879e-6■□□□□ 9.4
SSBP3-204ENST00000371320 PTGDRQ13258 359 aa33■■■□□ 2.87
SSBP3-204ENST00000371320 PIK3AP1Q6ZUJ8 805 aa33■■■□□ 2.87
SSBP3-204ENST00000371320 C15orf52Q6ZUT6 534 aaKnown RBP33■■■□□ 2.87
SSBP3-204ENST00000371320 KCNJ6P48051 423 aa32.99■■■□□ 2.87
SSBP3-204ENST00000371320 ATP2C1P98194 919 aaPredicted RBP32.99■■■□□ 2.87
SSBP3-204ENST00000371320 PNMA1Q8ND90 353 aa32.99■■■□□ 2.87
SSBP3-204ENST00000371320 NFE2L3Q9Y4A8 694 aa32.99■■■□□ 2.87
SSBP3-204ENST00000371320 VEGFAP15692 232 aaPredicted RBP32.98■■■□□ 2.87
SSBP3-204ENST00000371320 ADRA2BP18089 450 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 TRAPPC10P48553 1259 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 E4F1Q66K89 784 aaPredicted RBP32.98■■■□□ 2.87
SSBP3-204ENST00000371320 ANKS1AQ92625 1134 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 ROBO3Q96MS0 1386 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 GPSM2P81274 684 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 CCDC178Q5BJE1 867 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 TGFBRAP1Q8WUH2 860 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 LRRC4BQ9NT99 713 aa32.98■■■□□ 2.87
SSBP3-204ENST00000371320 SBF2Q86WG5 1849 aa32.97■■■□□ 2.87
SSBP3-204ENST00000371320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.97■■■□□ 2.87
SSBP3-204ENST00000371320 VWA3AA6NCI4 1184 aa32.97■■■□□ 2.87
SSBP3-204ENST00000371320 TOP1P11387 765 aaKnown RBP32.97■■■□□ 2.87
SSBP3-204ENST00000371320 AFMP43652 599 aa32.97■■■□□ 2.87
SSBP3-204ENST00000371320 PAGE5Q96GU1 130 aa32.97■■■□□ 2.87
SSBP3-204ENST00000371320 TMEM232C9JQI7 657 aa32.97■■■□□ 2.87
SSBP3-204ENST00000371320 CALML3P27482 149 aa32.97■■■□□ 2.87
SSBP3-204ENST00000371320 HSP90AA4PQ58FG1 418 aa32.97■■■□□ 2.87
SSBP3-204ENST00000371320 TSPY3P0CV98 308 aa32.96■■■□□ 2.87
SSBP3-204ENST00000371320 TSPY8P0CW00 308 aa32.96■■■□□ 2.87
SSBP3-204ENST00000371320 CDK11BP21127 795 aaKnown RBP32.96■■■□□ 2.87
SSBP3-204ENST00000371320 PLCD1P51178 756 aa32.96■■■□□ 2.87
SSBP3-204ENST00000371320 SH3RF1Q7Z6J0 888 aa32.96■■■□□ 2.87
SSBP3-204ENST00000371320 PSDA5PKW4 1024 aaPredicted RBP32.95■■■□□ 2.87
SSBP3-204ENST00000371320 KIF2AO00139 706 aaPredicted RBP32.95■■■□□ 2.87
SSBP3-204ENST00000371320 ZNF18P17022 549 aa32.95■■■□□ 2.87
SSBP3-204ENST00000371320 TRMT44Q8IYL2 757 aaKnown RBP32.95■■■□□ 2.87
SSBP3-204ENST00000371320 ZNF444Q8N0Y2 327 aaPredicted RBP32.95■■■□□ 2.87
SSBP3-204ENST00000371320 UFL1O94874 794 aa32.95■■■□□ 2.86
SSBP3-204ENST00000371320 ERCC5P28715 1186 aaPredicted RBP32.95■■■□□ 2.86
SSBP3-204ENST00000371320 BAZ2BQ9UIF8 2168 aaKnown RBP32.94■■■□□ 2.86
SSBP3-204ENST00000371320 USP17L3A6NCW0 530 aa32.94■■■□□ 2.86
SSBP3-204ENST00000371320 USP17L4A6NCW7 530 aa32.94■■■□□ 2.86
SSBP3-204ENST00000371320 GNAQP50148 359 aa32.94■■■□□ 2.86
SSBP3-204ENST00000371320 USP17L1Q7RTZ2 530 aa32.94■■■□□ 2.86
SSBP3-204ENST00000371320 SH3GLB2Q9NR46 395 aa32.94■■■□□ 2.86
SSBP3-204ENST00000371320 INTS13Q9NVM9 706 aa32.94■■■□□ 2.86
SSBP3-204ENST00000371320 GRM4Q14833 912 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 MEX3CQ5U5Q3 659 aaKnown RBP32.93■■■□□ 2.86
SSBP3-204ENST00000371320 MAPKAPK5Q8IW41 473 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 STAG2Q8N3U4 1231 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 PPP1R13BQ96KQ4 1090 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 CD209Q9NNX6 404 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 TCP11L1Q9NUJ3 509 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 ATP2B4P23634 1241 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 MCM7P33993 719 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 ST5P78524 1137 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 BLIDQ8IZY5 108 aa32.93■■■□□ 2.86
SSBP3-204ENST00000371320 RTFDC1Q9BY42 306 aaPredicted RBP32.93■■■□□ 2.86
SSBP3-204ENST00000371320 ADAMTS3O15072 1205 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 CRY2Q49AN0 593 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 CT47A1Q5JQC4 288 aaPredicted RBP32.92■■■□□ 2.86
SSBP3-204ENST00000371320 KIF18AQ8NI77 898 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 BCL11BQ9C0K0 894 aaPredicted RBP32.92■■■□□ 2.86
SSBP3-204ENST00000371320 SAP30BPQ9UHR5 308 aaKnown RBP32.92■■■□□ 2.86
SSBP3-204ENST00000371320 CERS3Q8IU89 383 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 SLC44A5Q8NCS7 719 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 GPKOWQ92917 476 aaPredicted RBP eCLIP32.92■■■□□ 2.861e-8■■□□□ 12.3
SSBP3-204ENST00000371320 RBM17Q96I25 401 aaKnown RBP32.92■■■□□ 2.86
SSBP3-204ENST00000371320 MED15Q96RN5 788 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 MAD2L2Q9UI95 211 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 GGA1Q9UJY5 639 aa32.92■■■□□ 2.86
SSBP3-204ENST00000371320 GSDMAQ96QA5 445 aa32.91■■■□□ 2.86
SSBP3-204ENST00000371320 GYS1P13807 737 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 BTDP43251 543 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 DPYDQ12882 1025 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 PTPN21Q16825 1174 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 ANKRD7Q92527 254 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 PCDHA4Q9UN74 947 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 SERPINB2P05120 415 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 CASP1P29466 404 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 SYCP1Q15431 976 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 TMX1Q9H3N1 280 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 ZNF287Q9HBT7 754 aa32.9■■■□□ 2.86
SSBP3-204ENST00000371320 IQUBQ8NA54 791 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms