RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 GTF2IP78347 998 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 U2AF1L4Q8WU68 220 aaKnown RBP24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 XPO4Q9C0E2 1151 aaKnown RBP24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 LMBRD1Q9NUN5 540 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 FAM102BQ5T8I3 360 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 MCUR1Q96AQ8 359 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 COL17A1Q9UMD9 1497 aaPredicted RBP24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 GAS7O60861 476 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 EIF4A1P60842 406 aaKnown RBP24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 LONRF2Q1L5Z9 754 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 VSIG1Q86XK7 387 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 VPS37BQ9H9H4 285 aa24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 ARPP21Q9UBL0 812 aaPredicted RBP24.5■■□□□ 1.51
TM9SF3-201ENST00000371142 PCK1P35558 622 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 DLGAP5Q15398 846 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 BSPRYQ5W0U4 402 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 GDAP1L1Q96MZ0 367 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 MAN1A1P33908 653 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 CTSWP56202 376 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 GPBP1Q86WP2 473 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 GABPB2Q8TAK5 448 aaPredicted RBP24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 UHRF1BP1Q6BDS2 1440 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 ABCC10Q5T3U5 1492 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 ATP5JP18859 108 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 TECP42680 631 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 MIER3Q7Z3K6 550 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 AFAP1L2Q8N4X5 818 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 SUPT20HQ8NEM7 779 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 TBX22Q9Y458 520 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 AFG3L2Q9Y4W6 797 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 TACC3Q9Y6A5 838 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 ZNF445P59923 1031 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 CCDC62Q6P9F0 684 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 CACNA2D3Q8IZS8 1091 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 MGARPQ8TDB4 240 aa24.49■■□□□ 1.51
TM9SF3-201ENST00000371142 NSMCE1Q8WV22 266 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 USP17L12C9JPN9 530 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 USP17L21D6R901 530 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 TSKSQ9UJT2 592 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 M0QZ92 97 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 PFKFB1P16118 471 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 ABCB4P21439 1286 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 INPP5BP32019 993 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 IRX3P78415 501 aaPredicted RBP24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 NLRX1Q86UT6 975 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 NIM1KQ8IY84 436 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 I3L4J1 428 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 CCDC84Q86UT8 332 aaPredicted RBP24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 HOOK2Q96ED9 719 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 CARD10Q9BWT7 1032 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 NT5C3AQ9H0P0 336 aa24.48■■□□□ 1.51
TM9SF3-201ENST00000371142 TESPA1A2RU30 521 aaPredicted RBP24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 GLG1Q92896 1179 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 GBP1P32455 592 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 ZSCAN10Q96SZ4 725 aaPredicted RBP24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 RRAGDQ9NQL2 400 aaPredicted RBP24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 PTPROQ16827 1216 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 ST7Q9NRC1 585 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 KCNJ18B7U540 433 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 KCNJ12Q14500 433 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 METTL13Q8N6R0 699 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 SDR42E1Q8WUS8 393 aa24.47■■□□□ 1.51
TM9SF3-201ENST00000371142 PPIP5K2O43314 1243 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 BUB1BO60566 1050 aaPredicted RBP24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 MFSD14BQ5SR56 506 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 DEPTORQ8TB45 409 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 MYSM1Q5VVJ2 828 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 DENND2CQ68D51 928 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 ANO3Q9BYT9 981 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 KDM3AQ9Y4C1 1321 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 PTH1RQ03431 593 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 PRR16Q569H4 304 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 LGSNQ5TDP6 509 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 OTUD6AQ7L8S5 288 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 TBC1D22AQ8WUA7 517 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 PPP1R12CQ9BZL4 782 aa24.46■■□□□ 1.51
TM9SF3-201ENST00000371142 A0A0D9SFI3 127 aa24.45■■□□□ 1.51
TM9SF3-201ENST00000371142 OAS2P29728 719 aaKnown RBP24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 GUCY2FP51841 1108 aa24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 ARHGEF16Q5VV41 709 aa24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 AMFRQ9UKV5 643 aa24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 GYG1P46976 350 aa24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 MORC3Q14149 939 aa24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 ANKRD42Q8N9B4 389 aa24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 RIOK1Q9BRS2 568 aaKnown RBP24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 PLCB1Q9NQ66 1216 aa24.45■■□□□ 1.5
TM9SF3-201ENST00000371142 GNA14O95837 355 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 MTMR3Q13615 1198 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 BLIDQ8IZY5 108 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 PAGR1Q9BTK6 254 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 TCIRG1Q13488 830 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 XRCC5P13010 732 aaKnown RBP24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 SPOUT1Q5T280 376 aaKnown RBP24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 IFNL3Q8IZI9 196 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 LRRC47Q8N1G4 583 aaKnown RBP24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 NR1I2O75469 434 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 GOLGA8HP0CJ92 632 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 CABS1Q96KC9 395 aa24.44■■□□□ 1.5
TM9SF3-201ENST00000371142 NUCKS1Q9H1E3 243 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms