RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TRIM6-TRIM34B2RNG4 842 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L15C9J2P7 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L13C9JLJ4 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L11C9JVI0 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L18D6R9N7 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L22D6RA61 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L17D6RBQ6 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L19D6RCP7 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L20D6RJB6 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 IGHA2P01877 340 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 VCAM1P19320 739 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 USP17L24Q0WX57 530 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 TRIM32Q13049 653 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 CERKLQ49MI3 558 aaPredicted RBP18.17■□□□□ 0.5
SS18L1-202ENST00000370848 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 GPR142Q7Z601 462 aa18.17■□□□□ 0.5
SS18L1-202ENST00000370848 PAWRQ96IZ0 340 aaKnown RBP18.17■□□□□ 0.5
SS18L1-202ENST00000370848 EPB41L4AQ9HCS5 686 aaPredicted RBP18.17■□□□□ 0.5
SS18L1-202ENST00000370848 GSG1L2A8MUP6 293 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 ABCB5Q2M3G0 1257 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 SKAP1Q86WV1 359 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 SLC44A5Q8NCS7 719 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 RILPL2Q969X0 211 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 DYNLL2Q96FJ2 89 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 APBA2Q99767 749 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 ATP8A2Q9NTI2 1148 aa18.16■□□□□ 0.5
SS18L1-202ENST00000370848 PARP14Q460N5 1801 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 EVI5O60447 810 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 PEX10O60683 326 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 HOXC6P09630 235 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 COL6A1P12109 1028 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 RGS2P41220 211 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 PLEKHH3Q7Z736 793 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 DIS3LQ8TF46 1054 aaKnown RBP18.15■□□□□ 0.5
SS18L1-202ENST00000370848 FAM227BQ96M60 508 aa18.15■□□□□ 0.5
SS18L1-202ENST00000370848 A0A0D9SFI3 127 aa18.14■□□□□ 0.49
SS18L1-202ENST00000370848 USP17L12C9JPN9 530 aa18.14■□□□□ 0.49
SS18L1-202ENST00000370848 USP17L21D6R901 530 aa18.14■□□□□ 0.49
SS18L1-202ENST00000370848 PRKAR2AP13861 404 aaKnown RBP18.14■□□□□ 0.49
SS18L1-202ENST00000370848 GSPT1P15170 499 aaKnown RBP18.14■□□□□ 0.49
SS18L1-202ENST00000370848 LRRFIP1Q32MZ4 808 aaKnown RBP18.14■□□□□ 0.49
SS18L1-202ENST00000370848 CTR9Q6PD62 1173 aa18.14■□□□□ 0.49
SS18L1-202ENST00000370848 ACER1Q8TDN7 264 aa18.14■□□□□ 0.49
SS18L1-202ENST00000370848 NBPF3Q9H094 633 aa18.14■□□□□ 0.49
SS18L1-202ENST00000370848 CABP5Q9NP86 173 aa18.14■□□□□ 0.49
SS18L1-202ENST00000370848 MYH8P13535 1937 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 DNAH12Q6ZR08 3092 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 SPDYE16A6NNV3 312 aaPredicted RBP18.13■□□□□ 0.49
SS18L1-202ENST00000370848 ZKSCAN1P17029 563 aaPredicted RBP18.13■□□□□ 0.49
SS18L1-202ENST00000370848 CYP2B6P20813 491 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 BMP8BP34820 402 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 CCNA1P78396 465 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 CACNB2Q08289 660 aaPredicted RBP18.13■□□□□ 0.49
SS18L1-202ENST00000370848 MAP2K5Q13163 448 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 NMIQ13287 307 aaPredicted RBP18.13■□□□□ 0.49
SS18L1-202ENST00000370848 C12orf60Q5U649 245 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 LHX8Q68G74 356 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 FEZ1Q99689 392 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 GDF15Q99988 308 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 SWAP70Q9UH65 585 aa18.13■□□□□ 0.49
SS18L1-202ENST00000370848 GREB1LQ9C091 1923 aaPredicted RBP18.12■□□□□ 0.49
SS18L1-202ENST00000370848 SLC15A5A6NIM6 579 aa18.12■□□□□ 0.49
SS18L1-202ENST00000370848 FOXP2O15409 715 aa18.12■□□□□ 0.49
SS18L1-202ENST00000370848 GRB14Q14449 540 aa18.12■□□□□ 0.49
SS18L1-202ENST00000370848 RAB3GAP1Q15042 981 aa18.12■□□□□ 0.49
SS18L1-202ENST00000370848 BTBD7Q9P203 1132 aa18.12■□□□□ 0.49
SS18L1-202ENST00000370848 PFASO15067 1338 aa18.12■□□□□ 0.49
SS18L1-202ENST00000370848 A0A1W2PRG0 241 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 CENPBP07199 599 aaPredicted RBP18.11■□□□□ 0.49
SS18L1-202ENST00000370848 PTPREP23469 700 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 SEPT2Q15019 361 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 TTC22Q5TAA0 569 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 TMEM179Q6ZVK1 233 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 STK11IPQ8N1F8 1099 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 PAGR1Q9BTK6 254 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 C11orf49Q9H6J7 331 aa18.11■□□□□ 0.49
SS18L1-202ENST00000370848 BAZ2AQ9UIF9 1905 aaKnown RBP18.1■□□□□ 0.49
SS18L1-202ENST00000370848 APPP05067 770 aa18.1■□□□□ 0.49
SS18L1-202ENST00000370848 SDSP20132 328 aa18.1■□□□□ 0.49
SS18L1-202ENST00000370848 CCL14Q16627 93 aa18.1■□□□□ 0.49
SS18L1-202ENST00000370848 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
SS18L1-202ENST00000370848 ZNF589Q86UQ0 364 aaPredicted RBP18.1■□□□□ 0.49
SS18L1-202ENST00000370848 IFNL3Q8IZI9 196 aa18.1■□□□□ 0.49
SS18L1-202ENST00000370848 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
SS18L1-202ENST00000370848 RPAP3Q9H6T3 665 aaPredicted RBP18.1■□□□□ 0.49
SS18L1-202ENST00000370848 ARPP21Q9UBL0 812 aaPredicted RBP18.1■□□□□ 0.49
SS18L1-202ENST00000370848 PATL2C9JE40 543 aaKnown RBP18.09■□□□□ 0.49
SS18L1-202ENST00000370848 NEFLP07196 543 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 GNAT2P19087 354 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 TDO2P48775 406 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 ZYXQ15942 572 aaKnown RBP18.09■□□□□ 0.49
SS18L1-202ENST00000370848 SIAH1Q8IUQ4 282 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 LPAR1Q92633 364 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 HELLSQ9NRZ9 838 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 COL6A3P12111 3177 aa18.09■□□□□ 0.49
SS18L1-202ENST00000370848 MINDY4BA8MYZ0 360 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 AKR1B1P15121 316 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms