RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ADCY9O60503 1353 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 PALLDQ8WX93 1383 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 PI4KAP2A4QPH2 592 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 ANKRD62A6NC57 917 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 C1QTNF9BB2RNN3 333 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 PIK3R2O00459 728 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 MSTNO14793 375 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 TREHO43280 583 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 LILRB5O75023 590 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 TRIM37O94972 964 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 CHRNA4P43681 627 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 TNNI2P48788 182 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 AIMP1Q12904 312 aaKnown RBP4.46□□□□□ -1.7
MCF2-202ENST00000370573 SF3B2Q13435 895 aaKnown RBP4.46□□□□□ -1.7
MCF2-202ENST00000370573 TRAPPC3LQ5T215 181 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 INTS5Q6P9B9 1019 aaKnown RBP4.46□□□□□ -1.7
MCF2-202ENST00000370573 ATCAYQ86WG3 371 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 FTSJ3Q8IY81 847 aaKnown RBP4.46□□□□□ -1.7
MCF2-202ENST00000370573 PI4KAP1Q8N8J0 262 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 TMEM87AQ8NBN3 555 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 GPR152Q8TDT2 470 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 TEX13AQ9BXU3 409 aaPredicted RBP4.46□□□□□ -1.7
MCF2-202ENST00000370573 TANGO6Q9C0B7 1094 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 WWC3Q9ULE0 1092 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 BTAF1O14981 1849 aa4.46□□□□□ -1.7
MCF2-202ENST00000370573 TJP1Q07157 1748 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 LAMB4A4D0S4 1761 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 J3QW42 95 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 STARD3NLO95772 234 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 FANCCQ00597 558 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 PLAURQ03405 335 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 FMR1Q06787 632 aaKnown RBP eCLIP4.45□□□□□ -1.7
MCF2-202ENST00000370573 TRIP4Q15650 581 aaPredicted RBP4.45□□□□□ -1.7
MCF2-202ENST00000370573 KSR2Q6VAB6 950 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 TTLL7Q6ZT98 887 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 CD163Q86VB7 1156 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 ITPRIPQ8IWB1 547 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 LINC00116Q8NCU8 138 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 NSUN5Q96P11 429 aaKnown RBP4.45□□□□□ -1.7
MCF2-202ENST00000370573 RBCK1Q9BYM8 510 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 PARP2Q9UGN5 583 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 NID1P14543 1247 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 NPR3P17342 541 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 MPSTP25325 297 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 ZAP70P43403 619 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 DSC3Q14574 896 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 GRIK4Q16099 956 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 BEND3Q5T5X7 828 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 SLC4A10Q6U841 1118 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 HELQQ8TDG4 1101 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 ACBD3Q9H3P7 528 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 ZBTB40Q9NUA8 1239 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 STIM2Q9P246 746 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 ZBTB1Q9Y2K1 713 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 MAP3K2Q9Y2U5 619 aa4.45□□□□□ -1.7
MCF2-202ENST00000370573 MYH14Q7Z406 1995 aaKnown RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 MMP20O60882 483 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 RGS9O75916 674 aaPredicted RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 PROCP04070 461 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 CRKLP46109 303 aaKnown RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 AFF1P51825 1210 aaKnown RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 PERM1Q5SV97 790 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 DNAAF4Q8WXU2 420 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 COL26A1Q96A83 441 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 DUSP9Q99956 384 aaKnown RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 CCDC87Q9NVE4 849 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 PRKAG2Q9UGJ0 569 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 DDX19BQ9UMR2 479 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 CCT4P50991 539 aaKnown RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 EIF5P55010 431 aaKnown RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 SMIM5Q71RC9 77 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 DMRTC2Q8IXT2 367 aaPredicted RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 PLBD2Q8NHP8 589 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 MEIS3Q99687 375 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 USP44Q9H0E7 712 aa4.44□□□□□ -1.7
MCF2-202ENST00000370573 CCNL1Q9UK58 526 aaPredicted RBP4.44□□□□□ -1.7
MCF2-202ENST00000370573 CICQ96RK0 1608 aaPredicted RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 ZNF831Q5JPB2 1677 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 IGHDP01880 384 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 IGKV5-2P06315 115 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 EIF2AK2P19525 551 aaKnown RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 IL6STP40189 918 aaPredicted RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 TRIM28Q13263 835 aaKnown RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 CWF19L2Q2TBE0 894 aaKnown RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 ELMSAN1Q6PJG2 1045 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 AMIGO3Q86WK7 504 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 METTL22Q9BUU2 404 aaPredicted RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 PIF1Q9H611 641 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 EFCC1Q9HA90 598 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 LY75O60449 1722 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 COL5A3P25940 1745 aaPredicted RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 MAP3K6O95382 1288 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 DDX58O95786 925 aaKnown RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 IGHA1P01876 353 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 LDHBP07195 334 aaKnown RBP4.43□□□□□ -1.7
MCF2-202ENST00000370573 MAPK8P45983 427 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 HLFQ16534 295 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 CCDC144BQ3MJ40 725 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 PRRT3Q5FWE3 981 aa4.43□□□□□ -1.7
MCF2-202ENST00000370573 SIRT2Q8IXJ6 389 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms