RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 PHKA1P46020 1223 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 GAS7O60861 476 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 CCDC94Q9BW85 323 aaPredicted RBP21.84■■□□□ 1.09
LMO4-202ENST00000370544 LSG1Q9H089 658 aaKnown RBP21.84■■□□□ 1.09
LMO4-202ENST00000370544 CTTNBP2NLQ9P2B4 639 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 ASAP1Q9ULH1 1129 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 MTMR6Q9Y217 621 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 MAGEA1P43355 309 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 KLHL30Q0D2K2 578 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 CCDC84Q86UT8 332 aaPredicted RBP21.84■■□□□ 1.09
LMO4-202ENST00000370544 GPR108Q9NPR9 543 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 SERPINA10Q9UK55 444 aa21.84■■□□□ 1.09
LMO4-202ENST00000370544 ROBO2Q9HCK4 1378 aa21.83■■□□□ 1.09
LMO4-202ENST00000370544 ADORA1P30542 326 aa21.83■■□□□ 1.09
LMO4-202ENST00000370544 SFMBT2Q5VUG0 894 aa21.83■■□□□ 1.09
LMO4-202ENST00000370544 NDC80O14777 642 aa21.83■■□□□ 1.09
LMO4-202ENST00000370544 PSTPIP2Q9H939 334 aa21.83■■□□□ 1.09
LMO4-202ENST00000370544 BCRP11274 1271 aa21.83■■□□□ 1.08
LMO4-202ENST00000370544 SCNN1DP51172 638 aa21.83■■□□□ 1.08
LMO4-202ENST00000370544 TNFAIP1Q13829 316 aa21.83■■□□□ 1.08
LMO4-202ENST00000370544 CCDC6Q16204 474 aa21.83■■□□□ 1.08
LMO4-202ENST00000370544 SCG2P13521 617 aa21.83■■□□□ 1.08
LMO4-202ENST00000370544 C2CD5Q86YS7 1000 aa21.83■■□□□ 1.08
LMO4-202ENST00000370544 TRIM6Q9C030 488 aaPredicted RBP21.83■■□□□ 1.08
LMO4-202ENST00000370544 KIAA1468Q9P260 1216 aa21.83■■□□□ 1.08
LMO4-202ENST00000370544 DBNLQ9UJU6 430 aaKnown RBP21.83■■□□□ 1.08
LMO4-202ENST00000370544 BAG6P46379 1132 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 IRX3P78415 501 aaPredicted RBP21.82■■□□□ 1.08
LMO4-202ENST00000370544 DOK7Q18PE1 504 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 LRRC47Q8N1G4 583 aaKnown RBP21.82■■□□□ 1.08
LMO4-202ENST00000370544 SMC6Q96SB8 1091 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 UTP11Q9Y3A2 253 aaKnown RBP21.82■■□□□ 1.08
LMO4-202ENST00000370544 ZNF804BA4D1E1 1349 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 ACTN4O43707 911 aaKnown RBP21.82■■□□□ 1.08
LMO4-202ENST00000370544 GPIHBP1Q8IV16 184 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 EBAG9O00559 213 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 DNM2P50570 870 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 MIER3Q7Z3K6 550 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 TLR7Q9NYK1 1049 aaKnown RBP21.82■■□□□ 1.08
LMO4-202ENST00000370544 FLOT1O75955 427 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 IL6STP40189 918 aaPredicted RBP21.82■■□□□ 1.08
LMO4-202ENST00000370544 C17orf53Q8N3J3 647 aaPredicted RBP21.82■■□□□ 1.08
LMO4-202ENST00000370544 CARD6Q9BX69 1037 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 AS3MTQ9HBK9 375 aa21.82■■□□□ 1.08
LMO4-202ENST00000370544 KLRF2D3W0D1 207 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 GNA14O95837 355 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 MCTP2Q6DN12 878 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 NLRX1Q86UT6 975 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 XPO4Q9C0E2 1151 aaKnown RBP21.81■■□□□ 1.08
LMO4-202ENST00000370544 NR1I2O75469 434 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 TECP42680 631 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 CEP128Q6ZU80 1094 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 GPBP1Q86WP2 473 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 SLF1Q9BQI6 1058 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 FAM204AQ9H8W3 233 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 H7C1D1 291 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 GOLGA8HP0CJ92 632 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 GPKOWQ92917 476 aaPredicted RBP eCLIP21.81■■□□□ 1.08
LMO4-202ENST00000370544 OGFRQ9NZT2 677 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 SAMD15Q9P1V8 674 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 PDIA3P30101 505 aaKnown RBP21.81■■□□□ 1.08
LMO4-202ENST00000370544 SNX16P57768 344 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 ZNF365Q70YC5 407 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 KIAA0825Q8IV33 1275 aa21.81■■□□□ 1.08
LMO4-202ENST00000370544 MNAT1P51948 309 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 CERKLQ49MI3 558 aaPredicted RBP21.8■■□□□ 1.08
LMO4-202ENST00000370544 MAP4K1Q92918 833 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 IQCDQ96DY2 449 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 FAM207AQ9NSI2 230 aaPredicted RBP21.8■■□□□ 1.08
LMO4-202ENST00000370544 E7EVH7 732 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 RIOK3O14730 519 aaKnown RBP21.8■■□□□ 1.08
LMO4-202ENST00000370544 ATP5DP30049 168 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 GALNT17Q6IS24 598 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 RNF34Q969K3 372 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 NUCKS1Q9H1E3 243 aaKnown RBP21.8■■□□□ 1.08
LMO4-202ENST00000370544 PRR16Q569H4 304 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 ZMYM1Q5SVZ6 1142 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 NEK8Q86SG6 692 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 TCP10L2B9ZVM9 353 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 GAS8O95995 478 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 PCP11498 1178 aaKnown RBP21.8■■□□□ 1.08
LMO4-202ENST00000370544 OTUD6AQ7L8S5 288 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 ZBTB1Q9Y2K1 713 aa21.8■■□□□ 1.08
LMO4-202ENST00000370544 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 OR52Z1P0C646 297 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 CMA1P23946 247 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 UAP1Q16222 522 aaPredicted RBP21.79■■□□□ 1.08
LMO4-202ENST00000370544 IFT20Q8IY31 132 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 NKIRAS1Q9NYS0 192 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 U2AF2P26368 475 aaKnown RBP eCLIP21.79■■□□□ 1.086e-6■□□□□ 8.6
LMO4-202ENST00000370544 SCRN1Q12765 414 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 RRAGAQ7L523 313 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 CCDC117Q8IWD4 279 aaPredicted RBP21.79■■□□□ 1.08
LMO4-202ENST00000370544 SYCE1Q8N0S2 351 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 RAB3IL1Q8TBN0 382 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 CEP104O60308 925 aa21.79■■□□□ 1.08
LMO4-202ENST00000370544 PRAMEF22A3QJZ6 481 aa21.78■■□□□ 1.08
LMO4-202ENST00000370544 KCNJ18B7U540 433 aa21.78■■□□□ 1.08
LMO4-202ENST00000370544 KCNJ12Q14500 433 aa21.78■■□□□ 1.08
LMO4-202ENST00000370544 ATP10DQ9P241 1426 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms