RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 HSD3B7Q9H2F3 369 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 FAM207AQ9NSI2 230 aaPredicted RBP11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 EHD2Q9NZN4 543 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 ZSWIM5Q9P217 1185 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 GDAQ9Y2T3 454 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 CEP170BQ9Y4F5 1589 aaPredicted RBP11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 E7EVH7 732 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 PRKAB2O43741 272 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 RAD21O60216 631 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 PPP6R2O75170 966 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 STAT6P42226 847 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 ATP6V1AP38606 617 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 CORO7P57737 925 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 CKAP4Q07065 602 aaKnown RBP11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 SLC20A2Q08357 652 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 MORC3Q14149 939 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 IQCEQ6IPM2 695 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 KLHL7Q8IXQ5 586 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 ORAI2Q96SN7 254 aa11.69□□□□□ -0.54
PRPF38B-201ENST00000370021 USO1O60763 962 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 NDUFA10O95299 355 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 NAA25Q14CX7 972 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 EZH2Q15910 746 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 KRT26Q7Z3Y9 468 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 OR8K1Q8NGG5 319 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 NCAPGQ9BPX3 1015 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 ZMYM6O95789 1325 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 KIF13AQ9H1H9 1805 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 CD44P16070 742 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 UBA7P41226 1012 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 KCNJ6P48051 423 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 COPB1P53618 953 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 PAK1Q13153 545 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 NR1I3Q14994 352 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 B4DLN1 442 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 GYPCP04921 128 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 ZFYP08048 801 aaPredicted RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 TMEM139Q8IV31 216 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 KCNH5Q8NCM2 988 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 SEC31BQ9NQW1 1179 aa11.68□□□□□ -0.54
PRPF38B-201ENST00000370021 SH3TC1Q8TE82 1336 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 USP54Q70EL1 1684 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 EXOC5O00471 708 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 OPA1O60313 960 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 GBP2P32456 591 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 RRP36Q96EU6 259 aaKnown RBP11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 PANX2Q96RD6 677 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 ABHD10Q9NUJ1 306 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 TLDC2A0PJX2 215 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 EIF4E1BA6NMX2 242 aaKnown RBP11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 GUCY1A3Q02108 690 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 C8orf74Q6P047 294 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 KSR1Q8IVT5 923 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 CCDC47Q96A33 483 aaKnown RBP11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 TBC1D31Q96DN5 1066 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 TRIM31Q9BZY9 425 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 SLC24A3Q9HC58 644 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 JAG2Q9Y219 1238 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 TTC26A0AVF1 554 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 MAP2K7O14733 419 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 TACC1O75410 805 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 KRT14P02533 472 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 IRAK1P51617 712 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 ERVK-24P63145 666 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 KRT83P78385 493 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 PTGDRQ13258 359 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 IQUBQ8NA54 791 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 PAGE5Q96GU1 130 aa11.67□□□□□ -0.54
PRPF38B-201ENST00000370021 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 NEBLO76041 1014 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 HNRNPH1P31943 449 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 SEC24CP53992 1094 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 ARHGEF25Q86VW2 580 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 NAA15Q9BXJ9 866 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 CXorf56Q9H5V9 222 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 CD248Q9HCU0 757 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 UBN2Q6ZU65 1347 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 NCK2O43639 380 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 VAV2P52735 878 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 CSGALNACT2Q8N6G5 542 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 CCDC43Q96MW1 224 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 VAT1LQ9HCJ6 419 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 NLRC4Q9NPP4 1024 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 TRMT112Q9UI30 125 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 OVOS2A0A0J9YW53 1432 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 OVOS2Q6IE36 1432 aa11.66□□□□□ -0.54
PRPF38B-201ENST00000370021 RNF225M0QZC1 329 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms