RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NLRC5Q86WI3 1866 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 CTAGE5O15320 804 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 LDHBP07195 334 aaKnown RBP8.06□□□□□ -1.12
CSDE1-204ENST00000369530 MKRN4PQ13434 485 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-204ENST00000369530 DLGAP5Q15398 846 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 ZSCAN23Q3MJ62 389 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 TREML2Q5T2D2 321 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 BTNL9Q6UXG8 535 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 OPTNQ96CV9 577 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 DHX36Q9H2U1 1008 aaKnown RBP8.06□□□□□ -1.12
CSDE1-204ENST00000369530 PAG1Q9NWQ8 432 aa8.06□□□□□ -1.12
CSDE1-204ENST00000369530 MYPNQ86TC9 1320 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 HOXC6P09630 235 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 COL6A1P12109 1028 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 U2AF2P26368 475 aaKnown RBP eCLIP8.05□□□□□ -1.122e-12■■■■□ 24.2
CSDE1-204ENST00000369530 NT5C2P49902 561 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 GSCP56915 257 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-204ENST00000369530 ERO1BQ86YB8 467 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF333Q96JL9 665 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 KIAA1683Q9H0B3 1180 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 DONSONQ9NYP3 566 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF532Q9HCE3 1301 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 DCAF8L1A6NGE4 600 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 ICE2Q659A1 982 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 CCSAPQ6IQ19 270 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-204ENST00000369530 DCPSQ96C86 337 aaKnown RBP8.05□□□□□ -1.12
CSDE1-204ENST00000369530 LRRCC1Q9C099 1032 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 DIAPH3Q9NSV4 1193 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 MANSC4A6NHS7 340 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-204ENST00000369530 ORC4O43929 436 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 DHX16O60231 1041 aaKnown RBP8.05□□□□□ -1.12
CSDE1-204ENST00000369530 TLR2O60603 784 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 CCDC172P0C7W6 258 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 RASA1P20936 1047 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 CACNB3P54284 484 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 LRSAM1Q6UWE0 723 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 GMCL1P1Q8NEA9 526 aa8.05□□□□□ -1.12
CSDE1-204ENST00000369530 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.05□□□□□ -1.123e-9■■□□□ 12
CSDE1-204ENST00000369530 UBE2Q2LH0YL09 131 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 SMARCA5O60264 1052 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-204ENST00000369530 CRHR2Q13324 411 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 NOLC1Q14978 699 aaKnown RBP eCLIP8.04□□□□□ -1.122e-7■□□□□ 10.8
CSDE1-204ENST00000369530 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF589Q86UQ0 364 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF341Q9BYN7 854 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 ATP8A2Q9NTI2 1148 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 ECHDC1Q9NTX5 307 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 EVCP57679 992 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 SEC23AQ15436 765 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 HSP90AB4PQ58FF6 505 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 DENND4AQ7Z401 1863 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 RPAINQ86UA6 219 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 SPRYD3Q8NCJ5 442 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 KIF18AQ8NI77 898 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 AGTPBP1Q9UPW5 1226 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 ZKSCAN4Q969J2 545 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-204ENST00000369530 C22orf23Q9BZE7 217 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 CCDC8Q9H0W5 538 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-204ENST00000369530 TXNRD2Q9NNW7 524 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 RBPJLQ9UBG7 517 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
CSDE1-204ENST00000369530 EDIL3O43854 480 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 NCBP1Q09161 790 aaKnown RBP8.03□□□□□ -1.12
CSDE1-204ENST00000369530 CT47A1Q5JQC4 288 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-204ENST00000369530 SWT1Q5T5J6 900 aaKnown RBP8.03□□□□□ -1.12
CSDE1-204ENST00000369530 SPTY2D1Q68D10 685 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-204ENST00000369530 HSCBQ8IWL3 235 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 MED4Q9NPJ6 270 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 APPP05067 770 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 CTCFP49711 727 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-204ENST00000369530 FOXP4Q8IVH2 680 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-204ENST00000369530 ZNF296Q8WUU4 475 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-204ENST00000369530 LMBRD1Q9NUN5 540 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 HDAC9Q9UKV0 1011 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 JAG2Q9Y219 1238 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 TMX2Q9Y320 296 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 TAF6LQ9Y6J9 622 aa8.03□□□□□ -1.12
CSDE1-204ENST00000369530 CLRN2A0PK11 232 aa8.02□□□□□ -1.12
CSDE1-204ENST00000369530 OPLAHO14841 1288 aa8.02□□□□□ -1.12
CSDE1-204ENST00000369530 SURF6O75683 361 aaKnown RBP8.02□□□□□ -1.12
CSDE1-204ENST00000369530 RAD51AP2Q09MP3 1159 aa8.02□□□□□ -1.12
CSDE1-204ENST00000369530 DGKZQ13574 1117 aa8.02□□□□□ -1.12
CSDE1-204ENST00000369530 TTF1Q15361 905 aaPredicted RBP8.02□□□□□ -1.12
CSDE1-204ENST00000369530 CATSPERGQ6ZRH7 1159 aa8.02□□□□□ -1.12
CSDE1-204ENST00000369530 PTPN22Q9Y2R2 807 aa8.02□□□□□ -1.12
CSDE1-204ENST00000369530 A0A0D9SFI3 127 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 PRKAB2O43741 272 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 BAG4O95429 457 aaKnown RBP8.02□□□□□ -1.13
CSDE1-204ENST00000369530 GNRH1P01148 92 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 ECE1P42892 770 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 TNFAIP1Q13829 316 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 SNX17Q15036 470 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 KRT222Q8N1A0 295 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 HELLSQ9NRZ9 838 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 USP40Q9NVE5 1235 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 LOC102724159A0A0B4J2E5 919 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 PWP2Q15269 919 aaKnown RBP8.02□□□□□ -1.13
CSDE1-204ENST00000369530 APPBP2Q92624 585 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 ZBTB21Q9ULJ3 1066 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms