RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CCDC42Q96M95 316 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 SIKE1Q9BRV8 207 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 EIF2AQ9BY44 585 aaKnown RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 DLGAP2Q9P1A6 1054 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 RBM47A0AV96 593 aaKnown RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 SPTLC2O15270 562 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 PYGLP06737 847 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 BICDL1Q6ZP65 573 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 ARHGAP45Q92619 1136 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 CCT8L2Q96SF2 557 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 NDEL1Q9GZM8 345 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 Q9H521 79 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 CNOT10Q9H9A5 744 aaKnown RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 TXLNGQ9NUQ3 528 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 MTMR6Q9Y217 621 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 ZDHHC9Q9Y397 364 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 NUB1Q9Y5A7 615 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 TTC21BQ7Z4L5 1316 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 EIF2AK4Q9P2K8 1649 aaKnown RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 LSM1O15116 133 aaKnown RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 MLH1P40692 756 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 GCLCP48506 637 aaPredicted RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 RAD23BP54727 409 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 VSNL1P62760 191 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 IRX4P78413 519 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 CCZ1BP86790 482 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 CCZ1P86791 482 aaPredicted RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 APBB1IPQ7Z5R6 666 aaPredicted RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 CCDC77Q9BR77 488 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 SERPINA10Q9UK55 444 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 POLR3AO14802 1390 aaPredicted RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 SERPINB4P48594 390 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 C11orf57Q6ZUT1 292 aaPredicted RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 RBM12BQ8IXT5 1001 aaKnown RBP11.51□□□□□ -0.57
PRDM1-201ENST00000369089 LRRC43Q8N309 656 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 ANKRD27Q96NW4 1050 aa11.51□□□□□ -0.57
PRDM1-201ENST00000369089 A0A1B0GVL5 298 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 PRC1O43663 620 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 E4F1Q66K89 784 aaPredicted RBP11.5□□□□□ -0.57
PRDM1-201ENST00000369089 CXorf38Q8TB03 319 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 WWC3Q9ULE0 1092 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 C15orf41Q9Y2V0 281 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 TARSL2A2RTX5 802 aaKnown RBP11.5□□□□□ -0.57
PRDM1-201ENST00000369089 CTNND1O60716 968 aaKnown RBP11.5□□□□□ -0.57
PRDM1-201ENST00000369089 LONP2Q86WA8 852 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 VPS37DQ86XT2 251 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 SLF1Q9BQI6 1058 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 IL16Q14005 1332 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 WASHC4Q2M389 1173 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 DYDC2Q96IM9 177 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 GPR101Q96P66 508 aaPredicted RBP11.5□□□□□ -0.57
PRDM1-201ENST00000369089 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRDM1-201ENST00000369089 SPZ1Q9BXG8 430 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 CCDC189A1A4V9 331 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 KRT75O95678 551 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 USP5P45974 858 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 HS2ST1Q7LGA3 356 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 SPATA17Q96L03 361 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 CARD9Q9H257 536 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 HAUS4Q9H6D7 363 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 CNGB3Q9NQW8 809 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 MBD5Q9P267 1494 aa11.5□□□□□ -0.57
PRDM1-201ENST00000369089 ATP7AQ04656 1500 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 ATP5JP18859 108 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 CFAP221Q4G0U5 840 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 BEND6Q5SZJ8 279 aaPredicted RBP11.49□□□□□ -0.57
PRDM1-201ENST00000369089 AKNAD1Q5T1N1 836 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 MTRF1LQ9UGC7 380 aaKnown RBP11.49□□□□□ -0.57
PRDM1-201ENST00000369089 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.49□□□□□ -0.57
PRDM1-201ENST00000369089 SASH3O75995 380 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 ZNF202O95125 648 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 STAMBPO95630 424 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 POLR3DP05423 398 aaPredicted RBP11.49□□□□□ -0.57
PRDM1-201ENST00000369089 CCDC62Q6P9F0 684 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 RGS12O14924 1447 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 COL17A1Q9UMD9 1497 aaPredicted RBP11.49□□□□□ -0.57
PRDM1-201ENST00000369089 F6X3S4 739 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 PFKFB2O60825 505 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 KRT38O76015 456 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 S100BP04271 92 aaPredicted RBP11.49□□□□□ -0.57
PRDM1-201ENST00000369089 SERPINB3P29508 390 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 USP4Q13107 963 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 CCDC68Q9H2F9 335 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 MBIPQ9NS73 344 aa11.49□□□□□ -0.57
PRDM1-201ENST00000369089 FYB2Q5VWT5 728 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
PRDM1-201ENST00000369089 ANKRD23Q86SG2 305 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 ANKRD44Q8N8A2 993 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 CCDC87Q9NVE4 849 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 PDP2Q9P2J9 529 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
PRDM1-201ENST00000369089 CHMLP26374 656 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 PDE5AO76074 875 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms