RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 KLRG1Q96E93 195 aa14.33□□□□□ -0.12
TUBE1-202ENST00000368662 WRNIP1Q96S55 665 aa14.33□□□□□ -0.12
TUBE1-202ENST00000368662 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
TUBE1-202ENST00000368662 SSC5DA1L4H1 1573 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
TUBE1-202ENST00000368662 JAG1P78504 1218 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 NTRK3Q16288 839 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 CLEC10AQ8IUN9 316 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 TRIM22Q8IYM9 498 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 SCYL3Q8IZE3 742 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 LRRC47Q8N1G4 583 aaKnown RBP14.32□□□□□ -0.12
TUBE1-202ENST00000368662 CDCA5Q96FF9 252 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 STK36Q9NRP7 1315 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 JAK2O60674 1132 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 SNHG28P0DPA3 235 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
TUBE1-202ENST00000368662 ASPRV1Q53RT3 343 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 TMTC3Q6ZXV5 915 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 GMCL1P1Q8NEA9 526 aa14.32□□□□□ -0.12
TUBE1-202ENST00000368662 PDHBP11177 359 aa14.31□□□□□ -0.12
TUBE1-202ENST00000368662 IREB2P48200 963 aaKnown RBP14.31□□□□□ -0.12
TUBE1-202ENST00000368662 SSRP1Q08945 709 aaKnown RBP14.31□□□□□ -0.12
TUBE1-202ENST00000368662 NOL9Q5SY16 702 aaKnown RBP14.31□□□□□ -0.12
TUBE1-202ENST00000368662 GPATCH4Q5T3I0 446 aaKnown RBP14.31□□□□□ -0.12
TUBE1-202ENST00000368662 SIAH1Q8IUQ4 282 aa14.31□□□□□ -0.12
TUBE1-202ENST00000368662 WASF1Q92558 559 aa14.31□□□□□ -0.12
TUBE1-202ENST00000368662 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
TUBE1-202ENST00000368662 PICK1Q9NRD5 415 aa14.31□□□□□ -0.12
TUBE1-202ENST00000368662 RBM27Q9P2N5 1060 aaKnown RBP14.31□□□□□ -0.12
TUBE1-202ENST00000368662 MAD2L2Q9UI95 211 aa14.31□□□□□ -0.12
TUBE1-202ENST00000368662 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
TUBE1-202ENST00000368662 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 USP17L5A8MUK1 530 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 FMNL1O95466 1100 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 SMARCA1P28370 1054 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 RGS22Q8NE09 1264 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 DCAF4Q8WV16 495 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 DDX11Q96FC9 970 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 RNF26Q9BY78 433 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 GLIS2Q9BZE0 524 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 AS3MTQ9HBK9 375 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 MYH4Q9Y623 1939 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 USP2O75604 605 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 INPP5BP32019 993 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 AKAP17AQ02040 695 aaKnown RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 LARP1BQ659C4 914 aaKnown RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 GMCL1Q96IK5 515 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 NMRK2Q9NPI5 230 aa14.3□□□□□ -0.12
TUBE1-202ENST00000368662 ORC3Q9UBD5 711 aaPredicted RBP14.3□□□□□ -0.12
TUBE1-202ENST00000368662 DEXIO95424 95 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 MAP3K9P80192 1104 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 MAP3K11Q16584 847 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 SLC26A6Q9BXS9 759 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 MTMR7Q9Y216 660 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 DOCK1Q14185 1865 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 KLRF2D3W0D1 207 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 F5H6K3 240 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 STX6O43752 255 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 FDPSP14324 419 aaKnown RBP14.29□□□□□ -0.12
TUBE1-202ENST00000368662 SYT1P21579 422 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 SLC1A4P43007 532 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 KLRC3Q07444 240 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 MAP1SQ66K74 1059 aaPredicted RBP14.29□□□□□ -0.12
TUBE1-202ENST00000368662 SLFN13Q68D06 897 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 USP17L2Q6R6M4 530 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 NBPF11Q86T75 865 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 PHKBQ93100 1093 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 ZKSCAN4Q969J2 545 aaPredicted RBP14.29□□□□□ -0.12
TUBE1-202ENST00000368662 CSADQ9Y600 493 aa14.29□□□□□ -0.12
TUBE1-202ENST00000368662 WDR33Q9C0J8 1336 aaKnown RBP14.28□□□□□ -0.12
TUBE1-202ENST00000368662 A0A1W2PRG0 241 aa14.28□□□□□ -0.12
TUBE1-202ENST00000368662 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
TUBE1-202ENST00000368662 ZNF543Q08ER8 600 aa14.28□□□□□ -0.12
TUBE1-202ENST00000368662 FUT2Q10981 343 aa14.28□□□□□ -0.12
TUBE1-202ENST00000368662 ARMC9Q7Z3E5 817 aa14.28□□□□□ -0.12
TUBE1-202ENST00000368662 STAG2Q8N3U4 1231 aa14.28□□□□□ -0.12
TUBE1-202ENST00000368662 SRBD1Q8N5C6 995 aaKnown RBP14.28□□□□□ -0.12
TUBE1-202ENST00000368662 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
TUBE1-202ENST00000368662 WDR18Q9BV38 432 aa14.28□□□□□ -0.12
TUBE1-202ENST00000368662 SPZ1Q9BXG8 430 aa14.28□□□□□ -0.12
TUBE1-202ENST00000368662 UNCXA6NJT0 531 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 RAD21O60216 631 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 PTPRAP18433 802 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 ECE1P42892 770 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 USP14P54578 494 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 PRKG1Q13976 671 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 ANKRD13AQ8IZ07 590 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 VCPKMTQ9H867 229 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.12
TUBE1-202ENST00000368662 NDUFB10O96000 172 aa14.27□□□□□ -0.13
TUBE1-202ENST00000368662 GOLGA8HP0CJ92 632 aa14.27□□□□□ -0.13
TUBE1-202ENST00000368662 TTLL12Q14166 644 aaPredicted RBP14.27□□□□□ -0.13
TUBE1-202ENST00000368662 CCDC96Q2M329 555 aa14.27□□□□□ -0.13
TUBE1-202ENST00000368662 DLK2Q6UY11 383 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms