RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 SCN9AQ15858 1988 aa9.12□□□□□ -0.95
MUC1-209ENST00000368396 ADAMTSL1Q8N6G6 1762 aa9.12□□□□□ -0.95
MUC1-209ENST00000368396 IGKV6D-41A0A0C4DH26 115 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 A0A1B0GVL5 298 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 hCG_1642624A0A1W2PR95 340 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 CUTAO60888 179 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 CAVIN2O95810 425 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 TOP1P11387 765 aaKnown RBP9.11□□□□□ -0.95
MUC1-209ENST00000368396 PFKFB1P16118 471 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 SMARCA1P28370 1054 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 MARCKSP29966 332 aaPredicted RBP9.11□□□□□ -0.95
MUC1-209ENST00000368396 NR5A1Q13285 461 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 PICALMQ13492 652 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 AOC3Q16853 763 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 SLC35G1Q2M3R5 365 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 HS1BP3Q53T59 392 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 CCDC93Q567U6 631 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 RESP18Q5W5W9 173 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 SASS6Q6UVJ0 657 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 RTKN2Q8IZC4 609 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 TTLL6Q8N841 843 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 KRI1Q8N9T8 703 aaKnown RBP9.11□□□□□ -0.95
MUC1-209ENST00000368396 FAM200AQ8TCP9 573 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 TIGD1Q96MW7 591 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 PSMD1Q99460 953 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 IDI2Q9BXS1 227 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 EHD4Q9H223 541 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 BRMS1Q9HCU9 246 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 SERPINB13Q9UIV8 391 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 SERPINA10Q9UK55 444 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 CEP131Q9UPN4 1083 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 HPSEQ9Y251 543 aa9.11□□□□□ -0.95
MUC1-209ENST00000368396 KIF13BQ9NQT8 1826 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 TRIM75PA6NK02 468 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 C21orf2O43822 256 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 HLA-DOAP06340 250 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 KCNA3P22001 575 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 PTPREP23469 700 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 CALML3P27482 149 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 SHMT1P34896 483 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 ANO6Q4KMQ2 910 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 SHC4Q6S5L8 630 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 FAM43AQ8N2R8 423 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 STAG2Q8N3U4 1231 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 ZNF579Q8NAF0 562 aaKnown RBP9.1□□□□□ -0.95
MUC1-209ENST00000368396 CEP95Q96GE4 821 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 SPZ1Q9BXG8 430 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 VPS33BQ9H267 617 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 CABP5Q9NP86 173 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 MTMR4Q9NYA4 1195 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 FBXO2Q9UK22 296 aaPredicted RBP9.1□□□□□ -0.95
MUC1-209ENST00000368396 STX8Q9UNK0 236 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 PSME4Q14997 1843 aa9.1□□□□□ -0.95
MUC1-209ENST00000368396 YDJCA8MPS7 323 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 CYTH3O43739 400 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 ZNF202O95125 648 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 BMP15O95972 392 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 PARP1P09874 1014 aaKnown RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 AKR1B1P15121 316 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 DPEP1P16444 411 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 SYKP43405 635 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 TRAPPC10P48553 1259 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 NLRP5P59047 1200 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 NFIAQ12857 509 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 STX1AQ16623 288 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 EARS2Q5JPH6 523 aaKnown RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 GALNT17Q6IS24 598 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 ELOA2Q8IYF1 753 aaPredicted RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 DAGLBQ8NCG7 672 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 TRIM44Q96DX7 344 aaPredicted RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 DHX36Q9H2U1 1008 aaKnown RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 CBX8Q9HC52 389 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 FAM198AQ9UFP1 575 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 NOL7Q9UMY1 257 aaKnown RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 PCDHB6Q9Y5E3 794 aa9.09□□□□□ -0.95
MUC1-209ENST00000368396 SRPRBQ9Y5M8 271 aaKnown RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 GREB1LQ9C091 1923 aaPredicted RBP9.09□□□□□ -0.95
MUC1-209ENST00000368396 FAM205CA6NFA0 338 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 KLRF2D3W0D1 207 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 SNHG28P0DPA3 235 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 VEGFAP15692 232 aaPredicted RBP9.08□□□□□ -0.96
MUC1-209ENST00000368396 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 SOGA3Q5TF21 947 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 METTL16Q86W50 562 aaKnown RBP9.08□□□□□ -0.96
MUC1-209ENST00000368396 CCDC125Q86Z20 511 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 ZFPM1Q8IX07 1006 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 CCDC148Q8NFR7 591 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 CCDC17Q96LX7 622 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 CLIC6Q96NY7 704 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 SDF4Q9BRK5 362 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 ANO10Q9NW15 660 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 BARHL2Q9NY43 387 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 KIAA1468Q9P260 1216 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 USP25Q9UHP3 1055 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 PCDHA4Q9UN74 947 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 PCDHAC2Q9Y5I4 1007 aa9.08□□□□□ -0.96
MUC1-209ENST00000368396 COL2A1P02458 1487 aaPredicted RBP9.08□□□□□ -0.96
MUC1-209ENST00000368396 SIPA1L1O43166 1804 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms