RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 SYT17Q9BSW7 474 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 MAP3K20Q9NYL2 800 aaKnown RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 PA2G4Q9UQ80 394 aaKnown RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 TRPC6Q9Y210 931 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 NOP58Q9Y2X3 529 aaKnown RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 RBM19Q9Y4C8 960 aaKnown RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 CYP2E1P05181 493 aaPredicted RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 SUPT20HL2P0C7V6 817 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 IBSPP21815 317 aaPredicted RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 SCP2P22307 547 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 HOXA10P31260 410 aaPredicted RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 XRRA1Q6P2D8 792 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 ZHX1Q9UKY1 873 aaPredicted RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 ZHX2Q9Y6X8 837 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 LTBP4Q8N2S1 1624 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 ITPK1Q13572 414 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 ELMOD1Q8N336 334 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 DBNDD2Q9BQY9 259 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 WDR11Q9BZH6 1224 aa9.38□□□□□ -0.91
SSR2-202ENST00000368311 ZNF70Q9UC06 446 aaPredicted RBP9.38□□□□□ -0.91
SSR2-202ENST00000368311 K7ELQ4 463 aaPredicted RBP9.37□□□□□ -0.91
SSR2-202ENST00000368311 PDE4AP27815 886 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 CDR1P51861 262 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 CPXCR1Q8N123 301 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 TDRD7Q8NHU6 1098 aaKnown RBP9.37□□□□□ -0.91
SSR2-202ENST00000368311 GOLGA5Q8TBA6 731 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
SSR2-202ENST00000368311 ACAD9Q9H845 621 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 CEP83Q9Y592 693 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 PSMD14O00487 310 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 STAM2O75886 525 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 ZAP70P43403 619 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 SMC1AQ14683 1233 aaKnown RBP9.37□□□□□ -0.91
SSR2-202ENST00000368311 CCDC65Q8IXS2 484 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 TSPYL6Q8N831 410 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 ZNF280CQ8ND82 737 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 URGCPQ8TCY9 931 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 MRIQ9BWK5 157 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 MROH8Q9H579 483 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 EXOC1Q9NV70 894 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 KCNQ3O43525 872 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 CABYRO75952 493 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 RARBP10826 455 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 STK3Q13188 491 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 ANGEL2Q5VTE6 544 aaKnown RBP9.37□□□□□ -0.91
SSR2-202ENST00000368311 SCYL3Q8IZE3 742 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 ZSCAN10Q96SZ4 725 aaPredicted RBP9.37□□□□□ -0.91
SSR2-202ENST00000368311 EFCC1Q9HA90 598 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 RCAN1P53805 252 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 STXBP2Q15833 593 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 MIS12Q9H081 205 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 SYNPO2Q9UMS6 1093 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 RBM8AQ9Y5S9 174 aaKnown RBP9.37□□□□□ -0.91
SSR2-202ENST00000368311 CEMIPQ8WUJ3 1361 aa9.37□□□□□ -0.91
SSR2-202ENST00000368311 ARHGEF35A5YM69 484 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 PNPLA7Q6ZV29 1317 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 MARCKSP29966 332 aaPredicted RBP9.36□□□□□ -0.91
SSR2-202ENST00000368311 AP3B2Q13367 1082 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 RGMBQ6NW40 437 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 INTS5Q6P9B9 1019 aaKnown RBP9.36□□□□□ -0.91
SSR2-202ENST00000368311 MIER3Q7Z3K6 550 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 HOOK3Q86VS8 718 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 TMEM232C9JQI7 657 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 HOXA2O43364 376 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 ORC2Q13416 577 aaPredicted RBP9.36□□□□□ -0.91
SSR2-202ENST00000368311 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
SSR2-202ENST00000368311 KCNG4Q8TDN1 519 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 RPS6KC1Q96S38 1066 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 ALG1Q9BT22 464 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 SMARCA5O60264 1052 aaPredicted RBP9.36□□□□□ -0.91
SSR2-202ENST00000368311 CPT1AP50416 773 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 JAK3P52333 1124 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 JAKMIP3Q5VZ66 844 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 TBC1D5Q92609 795 aa9.36□□□□□ -0.91
SSR2-202ENST00000368311 PABPN1LA6NDY0 278 aaKnown RBP9.35□□□□□ -0.91
SSR2-202ENST00000368311 SKIP12755 728 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 BFSP2Q13515 415 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 METTL23Q86XA0 190 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 MRVI1Q9Y6F6 885 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 BICDL2A1A5D9 508 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 LAD1O00515 517 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 TIMM10P62072 90 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 SURF1Q15526 300 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 G2E3Q7L622 706 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 IFNL3Q8IZI9 196 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 ZBTB40Q9NUA8 1239 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 NOC2LQ9Y3T9 749 aaKnown RBP9.35□□□□□ -0.91
SSR2-202ENST00000368311 MEGF6O75095 1541 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 PSAPP07602 524 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 HSPD1P10809 573 aaKnown RBP9.35□□□□□ -0.91
SSR2-202ENST00000368311 FOSBP53539 338 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 ESYT1Q9BSJ8 1104 aa9.35□□□□□ -0.91
SSR2-202ENST00000368311 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSR2-202ENST00000368311 ELP3Q9H9T3 547 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms