RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 A0A0G2JS52 829 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 ATP8B1O43520 1251 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 PRDM1O75626 825 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 CALML3P27482 149 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 KIF5BP33176 963 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 ADKP55263 362 aaKnown RBP16.23■□□□□ 0.19
CD48-201ENST00000368045 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 PFKFB3Q16875 520 aaPredicted RBP16.23■□□□□ 0.19
CD48-201ENST00000368045 BARGINQ6ZT62 677 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 ZNF446Q9NWS9 450 aa16.23■□□□□ 0.19
CD48-201ENST00000368045 CYP2D7A0A087X1C5 515 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 PPP1R3GB7ZBB8 358 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 CCDC175P0C221 793 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 AFMP43652 599 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 GNG11P61952 73 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 SPAG1Q07617 926 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 ZNF174Q15697 407 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 HSP90AA4PQ58FG1 418 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 ARL6IP4Q66PJ3 421 aaKnown RBP16.22■□□□□ 0.19
CD48-201ENST00000368045 TOGARAM2Q6ZUX3 1019 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 SRBD1Q8N5C6 995 aaKnown RBP16.22■□□□□ 0.19
CD48-201ENST00000368045 LRRN4CLQ8ND94 238 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 NYXQ9GZU5 481 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 DCP1AQ9NPI6 582 aaPredicted RBP16.22■□□□□ 0.19
CD48-201ENST00000368045 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 COL4A1P02462 1669 aa16.22■□□□□ 0.19
CD48-201ENST00000368045 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 FANCGO15287 622 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 GTPBP6O43824 516 aaPredicted RBP16.21■□□□□ 0.19
CD48-201ENST00000368045 ADAMTS2O95450 1211 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 CD44P16070 742 aaKnown RBP16.21■□□□□ 0.19
CD48-201ENST00000368045 FECHP22830 423 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 CLCN6P51797 869 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 NLRP5P59047 1200 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 MECOMQ03112 1051 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 PTGDRQ13258 359 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 TUBB2AQ13885 445 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 E2F4Q16254 413 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 FAM177A1Q8N128 213 aaPredicted RBP16.21■□□□□ 0.19
CD48-201ENST00000368045 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 TUBB2BQ9BVA1 445 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 RMND1Q9NWS8 449 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 MRFAP1Q9Y605 127 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 MYH14Q7Z406 1995 aaKnown RBP16.21■□□□□ 0.19
CD48-201ENST00000368045 KAT6BQ8WYB5 2073 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
CD48-201ENST00000368045 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 SMIM22K7EJ46 135 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 LONP1P36776 959 aaKnown RBP16.21■□□□□ 0.18
CD48-201ENST00000368045 SEMA3FQ13275 785 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 CCDC178Q5BJE1 867 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 TMCO3Q6UWJ1 677 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 CNGA4Q8IV77 575 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 KIFC2Q96AC6 838 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 CARD6Q9BX69 1037 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 LIMA1Q9UHB6 759 aaKnown RBP16.21■□□□□ 0.18
CD48-201ENST00000368045 RWDD2AQ9UIY3 292 aa16.21■□□□□ 0.18
CD48-201ENST00000368045 MYH6P13533 1939 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 COL5A3P25940 1745 aaPredicted RBP16.2■□□□□ 0.18
CD48-201ENST00000368045 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 LRRC10BA6NIK2 292 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 NPHP1O15259 732 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 MFAP3LO75121 409 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 HIBADHP31937 336 aaKnown RBP16.2■□□□□ 0.18
CD48-201ENST00000368045 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
CD48-201ENST00000368045 TRIM14Q14142 442 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 PTPN21Q16825 1174 aa16.2■□□□□ 0.18
CD48-201ENST00000368045 SPTY2D1Q68D10 685 aaPredicted RBP16.2■□□□□ 0.18
CD48-201ENST00000368045 GPR161Q8N6U8 529 aaKnown RBP16.2■□□□□ 0.18
CD48-201ENST00000368045 WNT7AO00755 349 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 TEX33O43247 280 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 ZRANB2O95218 330 aaKnown RBP eCLIP16.19■□□□□ 0.18
CD48-201ENST00000368045 KLHL10Q6JEL2 608 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 PDXDC2PQ6P474 469 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 ANKS1AQ92625 1134 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
CD48-201ENST00000368045 WDR24Q96S15 920 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 FHOD1Q9Y613 1164 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 ADGRG1Q9Y653 693 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 XDHP47989 1333 aa16.19■□□□□ 0.18
CD48-201ENST00000368045 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
CD48-201ENST00000368045 TXLNAP40222 546 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 GNAQP50148 359 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 TUBB4BP68371 445 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 PPP2R3AQ06190 1150 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 RBL2Q08999 1139 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 TERF2Q15554 542 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 PIK3AP1Q6ZUJ8 805 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 DGKHQ86XP1 1220 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 ANKRD20A12PQ8NF67 263 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 PNMA6AP0CW24 399 aaPredicted RBP16.18■□□□□ 0.18
CD48-201ENST00000368045 STX17P56962 302 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 JAKMIP3Q5VZ66 844 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 RSRC2Q7L4I2 434 aaKnown RBP16.18■□□□□ 0.18
CD48-201ENST00000368045 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
CD48-201ENST00000368045 RABGGTAQ92696 567 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms