RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 HMG20BQ9P0W2 317 aa18.12■□□□□ 0.49
VAMP4-202ENST00000367740 PA2G4Q9UQ80 394 aaKnown RBP18.12■□□□□ 0.49
VAMP4-202ENST00000367740 FLT1P17948 1338 aa18.12■□□□□ 0.49
VAMP4-202ENST00000367740 MYH1P12882 1939 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 ZNFX1Q9P2E3 1918 aaKnown RBP18.11■□□□□ 0.49
VAMP4-202ENST00000367740 COBLO75128 1261 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 C16orf59Q7L2K0 433 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 FOXP4Q8IVH2 680 aaPredicted RBP18.11■□□□□ 0.49
VAMP4-202ENST00000367740 MAPKAPK5Q8IW41 473 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 SLC44A5Q8NCS7 719 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 XAGE2Q96GT9 111 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 FEZ1Q99689 392 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 TRIM34Q9BYJ4 488 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 XPNPEP3Q9NQH7 507 aa18.11■□□□□ 0.49
VAMP4-202ENST00000367740 GH2P01242 217 aa18.1■□□□□ 0.49
VAMP4-202ENST00000367740 KCNQ1P51787 676 aa18.1■□□□□ 0.49
VAMP4-202ENST00000367740 TMEM240Q5SV17 173 aa18.1■□□□□ 0.49
VAMP4-202ENST00000367740 ANKRD33Q7Z3H0 272 aa18.1■□□□□ 0.49
VAMP4-202ENST00000367740 MOV10L1Q9BXT6 1211 aaKnown RBP18.1■□□□□ 0.49
VAMP4-202ENST00000367740 RAI14Q9P0K7 980 aa18.1■□□□□ 0.49
VAMP4-202ENST00000367740 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
VAMP4-202ENST00000367740 MYO5AQ9Y4I1 1855 aaKnown RBP18.09■□□□□ 0.49
VAMP4-202ENST00000367740 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 PTPRCP08575 1304 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 A0A1B0GUL7 405 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 STRNO43815 780 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 PGK1P00558 417 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 TIMP1P01033 207 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 MVPQ14764 893 aaKnown RBP18.09■□□□□ 0.49
VAMP4-202ENST00000367740 TMEM31Q5JXX7 168 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 ALYREFQ86V81 257 aaKnown RBP18.09■□□□□ 0.49
VAMP4-202ENST00000367740 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
VAMP4-202ENST00000367740 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 TGFBRAP1Q8WUH2 860 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 TOX2Q96NM4 488 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 KIAA1683Q9H0B3 1180 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 AATFQ9NY61 560 aaKnown RBP eCLIP18.09■□□□□ 0.49
VAMP4-202ENST00000367740 TBX21Q9UL17 535 aa18.09■□□□□ 0.49
VAMP4-202ENST00000367740 PARP14Q460N5 1801 aa18.08■□□□□ 0.48
VAMP4-202ENST00000367740 USP14P54578 494 aa18.08■□□□□ 0.48
VAMP4-202ENST00000367740 MFSD5Q6N075 450 aa18.08■□□□□ 0.48
VAMP4-202ENST00000367740 RNF180Q86T96 592 aa18.08■□□□□ 0.48
VAMP4-202ENST00000367740 MAML3Q96JK9 1138 aa18.08■□□□□ 0.48
VAMP4-202ENST00000367740 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.48
VAMP4-202ENST00000367740 C11orf16Q9NQ32 467 aa18.08■□□□□ 0.48
VAMP4-202ENST00000367740 RARBP10826 455 aa18.07■□□□□ 0.48
VAMP4-202ENST00000367740 ERCC3P19447 782 aa18.07■□□□□ 0.48
VAMP4-202ENST00000367740 PPIGQ13427 754 aaKnown RBP eCLIP18.07■□□□□ 0.48
VAMP4-202ENST00000367740 RAB30Q15771 203 aa18.07■□□□□ 0.48
VAMP4-202ENST00000367740 ACER1Q8TDN7 264 aa18.07■□□□□ 0.48
VAMP4-202ENST00000367740 NKX2-4Q9H2Z4 354 aa18.07■□□□□ 0.48
VAMP4-202ENST00000367740 RPAP3Q9H6T3 665 aaPredicted RBP18.07■□□□□ 0.48
VAMP4-202ENST00000367740 DCDC2CA8MYV0 355 aa18.06■□□□□ 0.48
VAMP4-202ENST00000367740 SHCBP1Q8NEM2 672 aa18.06■□□□□ 0.48
VAMP4-202ENST00000367740 NOL10Q9BSC4 688 aaKnown RBP18.06■□□□□ 0.48
VAMP4-202ENST00000367740 SPATC1LQ9H0A9 340 aa18.06■□□□□ 0.48
VAMP4-202ENST00000367740 COPRSQ9NQ92 184 aa18.06■□□□□ 0.48
VAMP4-202ENST00000367740 SAP30BPQ9UHR5 308 aaKnown RBP18.06■□□□□ 0.48
VAMP4-202ENST00000367740 YBX2Q9Y2T7 364 aaKnown RBP18.06■□□□□ 0.48
VAMP4-202ENST00000367740 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.06■□□□□ 0.48
VAMP4-202ENST00000367740 WDFY4Q6ZS81 3184 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 CSF2RAP15509 400 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 PLCG2P16885 1265 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 ARID4AP29374 1257 aaPredicted RBP18.05■□□□□ 0.48
VAMP4-202ENST00000367740 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 CCDC174Q6PII3 467 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 ADGRA1Q86SQ6 560 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 MICALL1Q8N3F8 863 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 LENG1Q96BZ8 264 aaPredicted RBP18.05■□□□□ 0.48
VAMP4-202ENST00000367740 SNX27Q96L92 541 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 SLC5A4Q9NY91 659 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
VAMP4-202ENST00000367740 COL11A1P12107 1806 aaPredicted RBP18.05■□□□□ 0.48
VAMP4-202ENST00000367740 ADAMTS4O75173 837 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 BAG3O95817 575 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 HLA-DOAP06340 250 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 ACRP10323 421 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 PPP4CP60510 307 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 TFCP2Q12800 502 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 RAB3GAP1Q15042 981 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 TATDN1Q6P1N9 297 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 PSRC1Q6PGN9 363 aaPredicted RBP18.04■□□□□ 0.48
VAMP4-202ENST00000367740 ZNF365Q70YC5 407 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 ABRAQ8N0Z2 381 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 KHSRPQ92945 711 aaKnown RBP eCLIP18.04■□□□□ 0.48
VAMP4-202ENST00000367740 SLC28A3Q9HAS3 691 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 STARD7Q9NQZ5 370 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 NRBP1Q9UHY1 535 aa18.04■□□□□ 0.48
VAMP4-202ENST00000367740 PRRC2BQ5JSZ5 2229 aaKnown RBP18.03■□□□□ 0.48
VAMP4-202ENST00000367740 FAM86C2PA6NEL3 165 aa18.03■□□□□ 0.48
VAMP4-202ENST00000367740 ERC2O15083 957 aa18.03■□□□□ 0.48
VAMP4-202ENST00000367740 GPR37L1O60883 481 aa18.03■□□□□ 0.48
VAMP4-202ENST00000367740 UBTFL1P0CB47 393 aaPredicted RBP18.03■□□□□ 0.48
VAMP4-202ENST00000367740 MCAMP43121 646 aa18.03■□□□□ 0.48
VAMP4-202ENST00000367740 ACLYP53396 1101 aa18.03■□□□□ 0.48
VAMP4-202ENST00000367740 NAA16Q6N069 864 aaPredicted RBP18.03■□□□□ 0.48
VAMP4-202ENST00000367740 LRP2BPQ9P2M1 347 aa18.03■□□□□ 0.48
VAMP4-202ENST00000367740 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
VAMP4-202ENST00000367740 TAL1P17542 331 aaPredicted RBP18.02■□□□□ 0.48
VAMP4-202ENST00000367740 ATF7IPQ6VMQ6 1270 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms