RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 MYL10Q9BUA6 226 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 DHX36Q9H2U1 1008 aaKnown RBP11.12□□□□□ -0.63
VTA1-201ENST00000367621 MKNK2Q9HBH9 465 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 CNOT7Q9UIV1 285 aaKnown RBP11.12□□□□□ -0.63
VTA1-201ENST00000367621 GJA3Q9Y6H8 435 aa11.12□□□□□ -0.63
VTA1-201ENST00000367621 COL2A1P02458 1487 aaPredicted RBP11.12□□□□□ -0.63
VTA1-201ENST00000367621 TSPY2A6NKD2 308 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 PPP1R3GB7ZBB8 358 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 TCP10L2B9ZVM9 353 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 ZBTB43O43298 467 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 RXRAP19793 462 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 SYT1P21579 422 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 RCAN1P53805 252 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 NUCB2P80303 420 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 TROAPQ12815 778 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 RRP1BQ14684 758 aaKnown RBP11.11□□□□□ -0.63
VTA1-201ENST00000367621 MFSD10Q14728 455 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
VTA1-201ENST00000367621 E2F4Q16254 413 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 SAMD7Q7Z3H4 446 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 IQCA1Q86XH1 822 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 DGKHQ86XP1 1220 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 ZNF654Q8IZM8 581 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
VTA1-201ENST00000367621 FAM151AQ8WW52 585 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 TNPO1Q92973 898 aaKnown RBP11.11□□□□□ -0.63
VTA1-201ENST00000367621 PI4KBQ9UBF8 816 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 SWAP70Q9UH65 585 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 SERPINB13Q9UIV8 391 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 RABGEF1Q9UJ41 708 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 SLC12A7Q9Y666 1083 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 PLIN4Q96Q06 1357 aa11.11□□□□□ -0.63
VTA1-201ENST00000367621 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
VTA1-201ENST00000367621 ASTN2O75129 1339 aaPredicted RBP11.1□□□□□ -0.63
VTA1-201ENST00000367621 PTPDC1A2A3K4 754 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 CCDC69A6NI79 296 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
VTA1-201ENST00000367621 HLA-DOAP06340 250 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 AKR1B1P15121 316 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 METAP2P50579 478 aaKnown RBP eCLIP11.1□□□□□ -0.63
VTA1-201ENST00000367621 JAG1P78504 1218 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 FUT2Q10981 343 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 SHROOM1Q2M3G4 852 aaPredicted RBP11.1□□□□□ -0.63
VTA1-201ENST00000367621 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
VTA1-201ENST00000367621 C9orf131Q5VYM1 1079 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 TATDN1Q6P1N9 297 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 CLEC17AQ6ZS10 378 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 FAM83AQ86UY5 434 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 MICU3Q86XE3 530 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
VTA1-201ENST00000367621 GPC2Q8N158 579 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 DDX27Q96GQ7 796 aaKnown RBP11.1□□□□□ -0.63
VTA1-201ENST00000367621 ZNF287Q9HBT7 754 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 GPRC5DQ9NZD1 345 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 NAP1L2Q9ULW6 460 aaPredicted RBP11.1□□□□□ -0.63
VTA1-201ENST00000367621 MTMR6Q9Y217 621 aa11.1□□□□□ -0.63
VTA1-201ENST00000367621 NAV1Q8NEY1 1877 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 ERICH2A1L162 156 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 GOLGA8AA7E2F4 631 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 TSPY3P0CV98 308 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 TSPY8P0CW00 308 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
VTA1-201ENST00000367621 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 MAP3K10Q02779 954 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 TBC1D10BQ4KMP7 808 aaPredicted RBP11.09□□□□□ -0.63
VTA1-201ENST00000367621 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
VTA1-201ENST00000367621 NBPF11Q86T75 865 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 CCDC144CPQ8IYA2 1237 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 FANCBQ8NB91 859 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 TRPM4Q8TD43 1214 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 DDX11Q96FC9 970 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 TEPSINQ96N21 525 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 RNF181Q9P0P0 153 aa11.09□□□□□ -0.63
VTA1-201ENST00000367621 CDK5RAP2Q96SN8 1893 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 LAMB1P07942 1786 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 FOCADQ5VW36 1801 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 STX6O43752 255 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 DDAH1O94760 285 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 DDNO94850 711 aaPredicted RBP11.08□□□□□ -0.64
VTA1-201ENST00000367621 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 EPS15P42566 896 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 CCDC178Q5BJE1 867 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 SIAH1Q8IUQ4 282 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 CEP95Q96GE4 821 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 TMEM47Q9BQJ4 181 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 VEZTQ9HBM0 779 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 MTMR4Q9NYA4 1195 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 TMOD2Q9NZR1 351 aa11.08□□□□□ -0.64
VTA1-201ENST00000367621 UBE2Q2LH0YL09 131 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 DHX16O60231 1041 aaKnown RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 ZSCAN22P10073 491 aaPredicted RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 IFNAR1P17181 557 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
VTA1-201ENST00000367621 RASA3Q14644 834 aa11.07□□□□□ -0.64
VTA1-201ENST00000367621 NFKBIBQ15653 356 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms