RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 TMOD4Q9NZQ9 345 aa11.71□□□□□ -0.53
NUP43-202ENST00000367402 TSPY2A6NKD2 308 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 C19orf81C9J6K1 198 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 PDHXO00330 501 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 FOXN1O15353 648 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
NUP43-202ENST00000367402 ICA1Q05084 483 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 MOGSQ13724 837 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 AKNAD1Q5T1N1 836 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 ANKRD23Q86SG2 305 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 ACER1Q8TDN7 264 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 RNF41Q9H4P4 317 aaPredicted RBP11.7□□□□□ -0.54
NUP43-202ENST00000367402 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 ANO2Q9NQ90 1003 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
NUP43-202ENST00000367402 TACC3Q9Y6A5 838 aa11.7□□□□□ -0.54
NUP43-202ENST00000367402 THSD7BQ9C0I4 1608 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 BAZ2AQ9UIF9 1905 aaKnown RBP11.69□□□□□ -0.54
NUP43-202ENST00000367402 ORC4O43929 436 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 EEF2P13639 858 aaKnown RBP11.69□□□□□ -0.54
NUP43-202ENST00000367402 DGKZQ13574 1117 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
NUP43-202ENST00000367402 SH3D19Q5HYK7 790 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 GPAT2Q6NUI2 795 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 STAG1Q8WVM7 1258 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
NUP43-202ENST00000367402 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
NUP43-202ENST00000367402 PCNTO95613 3336 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 A0A1W2PRG0 241 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 RAD21O60216 631 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 FGRP09769 529 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 PCP11498 1178 aaKnown RBP11.68□□□□□ -0.54
NUP43-202ENST00000367402 LBX1P52954 281 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 USP14P54578 494 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 CRHR2Q13324 411 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 TREML2Q5T2D2 321 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 PROCA1Q8NCQ7 364 aaPredicted RBP11.68□□□□□ -0.54
NUP43-202ENST00000367402 NEDD1Q8NHV4 660 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
NUP43-202ENST00000367402 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 ZFYVE28Q9HCC9 887 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 ZCCHC17Q9NP64 241 aaKnown RBP11.68□□□□□ -0.54
NUP43-202ENST00000367402 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 AGTPBP1Q9UPW5 1226 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 RBM8AQ9Y5S9 174 aaKnown RBP11.68□□□□□ -0.54
NUP43-202ENST00000367402 DOCK1Q14185 1865 aa11.68□□□□□ -0.54
NUP43-202ENST00000367402 CYP2C8P10632 490 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 HSPA8P11142 646 aaKnown RBP11.67□□□□□ -0.54
NUP43-202ENST00000367402 OSBPP22059 807 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 PABPC4Q13310 644 aaKnown RBP eCLIP11.67□□□□□ -0.54
NUP43-202ENST00000367402 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 ESR2Q92731 530 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 CEP95Q96GE4 821 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 PARK7Q99497 189 aaKnown RBP11.67□□□□□ -0.54
NUP43-202ENST00000367402 R3HDMLQ9H3Y0 253 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 MTMR4Q9NYA4 1195 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
NUP43-202ENST00000367402 NEDD4P46934 1319 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 IGKV6D-41A0A0C4DH26 115 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 NMT2O60551 498 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 TTLL1O95922 423 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 CYP21A2P08686 494 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 TRDNQ13061 729 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
NUP43-202ENST00000367402 SPICE1Q8N0Z3 855 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
NUP43-202ENST00000367402 CFHR5Q9BXR6 569 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 KRT23Q9C075 422 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 CNNM2Q9H8M5 875 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 GOPCQ9HD26 462 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 NYAP2Q9P242 653 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 PNMA3Q9UL41 463 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 STX8Q9UNK0 236 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
NUP43-202ENST00000367402 B4E1Z4 1266 aa11.65□□□□□ -0.54
NUP43-202ENST00000367402 GPR25O00155 361 aa11.65□□□□□ -0.54
NUP43-202ENST00000367402 TLR2O60603 784 aa11.65□□□□□ -0.54
NUP43-202ENST00000367402 KDM4AO75164 1064 aa11.65□□□□□ -0.54
NUP43-202ENST00000367402 VCAM1P19320 739 aa11.65□□□□□ -0.54
NUP43-202ENST00000367402 IRX3P78415 501 aaPredicted RBP11.65□□□□□ -0.54
NUP43-202ENST00000367402 C12orf42Q96LP6 360 aa11.65□□□□□ -0.54
NUP43-202ENST00000367402 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
NUP43-202ENST00000367402 VCPKMTQ9H867 229 aa11.65□□□□□ -0.54
NUP43-202ENST00000367402 PLIN4Q96Q06 1357 aa11.65□□□□□ -0.55
NUP43-202ENST00000367402 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
NUP43-202ENST00000367402 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms