RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TRERF1Q96PN7 1200 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 NAPBQ9H115 298 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 FOXP1Q9H334 677 aaPredicted RBP16.76■□□□□ 0.27
PRKN-204ENST00000366896 CACNA1SQ13698 1873 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 OAS2P29728 719 aaKnown RBP16.76■□□□□ 0.27
PRKN-204ENST00000366896 ZNF622Q969S3 477 aaKnown RBP eCLIP16.76■□□□□ 0.27
PRKN-204ENST00000366896 ZKSCAN3Q9BRR0 538 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 FANCLQ9NW38 375 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 KCNJ14Q9UNX9 436 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 PCDHA5Q9Y5H7 936 aa16.76■□□□□ 0.27
PRKN-204ENST00000366896 BTBD18B2RXH4 712 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 ZSCAN12O43309 604 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 PTPREP23469 700 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 TOB1P50616 345 aaPredicted RBP16.75■□□□□ 0.27
PRKN-204ENST00000366896 MAP3K12Q12852 859 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 RILPL1Q5EBL4 403 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 TMTC2Q8N394 836 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 GPR161Q8N6U8 529 aaKnown RBP16.75■□□□□ 0.27
PRKN-204ENST00000366896 TRIML1Q8N9V2 468 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 CNNM3Q8NE01 707 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 KIAA1551Q9HCM1 1747 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 DOCK2Q92608 1830 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 VWA3AA6NCI4 1184 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 PPEF1O14829 653 aaPredicted RBP16.75■□□□□ 0.27
PRKN-204ENST00000366896 MMP1P03956 469 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRKN-204ENST00000366896 HSP90AA4PQ58FG1 418 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 CT47A1Q5JQC4 288 aaPredicted RBP16.75■□□□□ 0.27
PRKN-204ENST00000366896 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
PRKN-204ENST00000366896 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 CHD4Q14839 1912 aa16.75■□□□□ 0.27
PRKN-204ENST00000366896 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 GPS2Q13227 327 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
PRKN-204ENST00000366896 TMC4Q7Z404 712 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 CMTR1Q8N1G2 835 aaKnown RBP16.74■□□□□ 0.27
PRKN-204ENST00000366896 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 CCDC196A0A1B0GTZ2 297 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 SLC5A1P13866 664 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 PPP2R5BQ15173 497 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 TMEM139Q8IV31 216 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 LCORLQ8N3X6 602 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
PRKN-204ENST00000366896 ZCCHC17Q9NP64 241 aaKnown RBP16.74■□□□□ 0.27
PRKN-204ENST00000366896 GOLGA6L9A6NEM1 432 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 ARHGAP6O43182 974 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 SARSP49591 514 aaKnown RBP16.73■□□□□ 0.27
PRKN-204ENST00000366896 KANK3Q6NY19 840 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 RSRC2Q7L4I2 434 aaKnown RBP16.73■□□□□ 0.27
PRKN-204ENST00000366896 DIS3L2Q8IYB7 885 aaKnown RBP16.73■□□□□ 0.27
PRKN-204ENST00000366896 TRIM22Q8IYM9 498 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 EPC1Q9H2F5 836 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 PPP2R2CQ9Y2T4 447 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 SLX4Q8IY92 1834 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
PRKN-204ENST00000366896 PDE4CQ08493 712 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 TBX2Q13207 712 aaPredicted RBP16.73■□□□□ 0.27
PRKN-204ENST00000366896 UBE4AQ14139 1066 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
PRKN-204ENST00000366896 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 ENOX1Q8TC92 643 aaKnown RBP16.73■□□□□ 0.27
PRKN-204ENST00000366896 TRIM34Q9BYJ4 488 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 ATP6V0A2Q9Y487 856 aa16.73■□□□□ 0.27
PRKN-204ENST00000366896 DEXIO95424 95 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 TOP1P11387 765 aaKnown RBP16.72■□□□□ 0.27
PRKN-204ENST00000366896 DPEP1P16444 411 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 NACAP1Q9BZK3 213 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 SPON1Q9HCB6 807 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 FBXO2Q9UK22 296 aaPredicted RBP16.72■□□□□ 0.27
PRKN-204ENST00000366896 LTBP1Q14766 1721 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 XDHP47989 1333 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 ZNF18P17022 549 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 KCNA3P22001 575 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 GPSM2P81274 684 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 NR5A1Q13285 461 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 GRAMD1CQ8IYS0 662 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 ARFGAP3Q9NP61 516 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 MAN1B1Q9UKM7 699 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 CEP131Q9UPN4 1083 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 MRFAP1Q9Y605 127 aa16.72■□□□□ 0.27
PRKN-204ENST00000366896 TDO2P48775 406 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 TGFB2P61812 414 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRKN-204ENST00000366896 RTN1Q16799 776 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 SPATA20Q8TB22 786 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 FUT8Q9BYC5 575 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
PRKN-204ENST00000366896 CASQ1P31415 396 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 PPP2R3AQ06190 1150 aa16.71■□□□□ 0.27
PRKN-204ENST00000366896 POSTNQ15063 836 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms