RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 PNMA3Q9UL41 463 aa18.28■□□□□ 0.52
PRKN-203ENST00000366894 A0A1W2PRG0 241 aa18.27■□□□□ 0.52
PRKN-203ENST00000366894 ECM2O94769 699 aaPredicted RBP18.27■□□□□ 0.52
PRKN-203ENST00000366894 MYCP01106 439 aaPredicted RBP18.27■□□□□ 0.52
PRKN-203ENST00000366894 RNF20Q5VTR2 975 aa18.27■□□□□ 0.52
PRKN-203ENST00000366894 USP17L2Q6R6M4 530 aa18.27■□□□□ 0.52
PRKN-203ENST00000366894 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
PRKN-203ENST00000366894 C12orf42Q96LP6 360 aa18.27■□□□□ 0.52
PRKN-203ENST00000366894 FEZ1Q99689 392 aa18.27■□□□□ 0.52
PRKN-203ENST00000366894 SYNPO2Q9UMS6 1093 aa18.27■□□□□ 0.52
PRKN-203ENST00000366894 TSPY2A6NKD2 308 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 REC8O95072 547 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
PRKN-203ENST00000366894 AKNAD1Q5T1N1 836 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 VPS53Q5VIR6 699 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 POTEEQ6S8J3 1075 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 SMCR8Q8TEV9 937 aaPredicted RBP18.26■□□□□ 0.51
PRKN-203ENST00000366894 ESR2Q92731 530 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 ESYT1Q9BSJ8 1104 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.26■□□□□ 0.516e-17■■■■■ 149.9
PRKN-203ENST00000366894 KRT23Q9C075 422 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 TOMM22Q9NS69 142 aa18.26■□□□□ 0.51
PRKN-203ENST00000366894 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
PRKN-203ENST00000366894 H0YGN5 161 aa18.25■□□□□ 0.51
PRKN-203ENST00000366894 ORC4O43929 436 aa18.25■□□□□ 0.51
PRKN-203ENST00000366894 GNRH1P01148 92 aa18.25■□□□□ 0.51
PRKN-203ENST00000366894 OSBPP22059 807 aa18.25■□□□□ 0.51
PRKN-203ENST00000366894 PSMC4P43686 418 aa18.25■□□□□ 0.51
PRKN-203ENST00000366894 SH3TC2Q8TF17 1288 aa18.25■□□□□ 0.51
PRKN-203ENST00000366894 P2RX7Q99572 595 aaKnown RBP18.25■□□□□ 0.51
PRKN-203ENST00000366894 GREB1LQ9C091 1923 aaPredicted RBP18.25■□□□□ 0.51
PRKN-203ENST00000366894 EPB41L2O43491 1005 aaKnown RBP18.24■□□□□ 0.51
PRKN-203ENST00000366894 FGRP09769 529 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 RASA1P20936 1047 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 TFAP4Q01664 338 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 ICA1Q05084 483 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 ANKRD13CQ8N6S4 541 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 NEDD1Q8NHV4 660 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 STAG1Q8WVM7 1258 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 LPAR1Q92633 364 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 MGAMO43451 1857 aa18.24■□□□□ 0.51
PRKN-203ENST00000366894 RANBP6O60518 1105 aaKnown RBP18.23■□□□□ 0.51
PRKN-203ENST00000366894 PEX10O60683 326 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 TTLL1O95922 423 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 VCAM1P19320 739 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 GCLCP48506 637 aaPredicted RBP18.23■□□□□ 0.51
PRKN-203ENST00000366894 PRMT2P55345 433 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 FAM110CQ1W6H9 321 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 GTF3C2Q8WUA4 911 aaPredicted RBP18.23■□□□□ 0.51
PRKN-203ENST00000366894 TTC14Q96N46 770 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 NYAP2Q9P242 653 aa18.23■□□□□ 0.51
PRKN-203ENST00000366894 FMNL1O95466 1100 aaPredicted RBP18.22■□□□□ 0.51
PRKN-203ENST00000366894 HERVK_113P62684 666 aa18.22■□□□□ 0.51
PRKN-203ENST00000366894 IRX3P78415 501 aaPredicted RBP18.22■□□□□ 0.51
PRKN-203ENST00000366894 CTDSPL2Q05D32 466 aa18.22■□□□□ 0.51
PRKN-203ENST00000366894 TXNRD2Q9NNW7 524 aa18.22■□□□□ 0.51
PRKN-203ENST00000366894 TCP11L1Q9NUJ3 509 aa18.22■□□□□ 0.51
PRKN-203ENST00000366894 MORF4L1Q9UBU8 362 aa18.22■□□□□ 0.51
PRKN-203ENST00000366894 SRRDQ9UH36 339 aa18.22■□□□□ 0.51
PRKN-203ENST00000366894 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
PRKN-203ENST00000366894 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
PRKN-203ENST00000366894 FCGRTP55899 365 aa18.21■□□□□ 0.51
PRKN-203ENST00000366894 ATP2B2Q01814 1243 aa18.21■□□□□ 0.51
PRKN-203ENST00000366894 CATSPERGQ6ZRH7 1159 aa18.21■□□□□ 0.51
PRKN-203ENST00000366894 MKL1Q969V6 931 aa18.21■□□□□ 0.51
PRKN-203ENST00000366894 RBPJLQ9UBG7 517 aa18.21■□□□□ 0.51
PRKN-203ENST00000366894 TACC3Q9Y6A5 838 aa18.21■□□□□ 0.51
PRKN-203ENST00000366894 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 PRDM1O75626 825 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 EEF2P13639 858 aaKnown RBP18.2■□□□□ 0.5
PRKN-203ENST00000366894 PRKCZQ05513 592 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 SART3Q15020 963 aaKnown RBP18.2■□□□□ 0.5
PRKN-203ENST00000366894 RRP12Q5JTH9 1297 aaKnown RBP18.2■□□□□ 0.5
PRKN-203ENST00000366894 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 RALYLQ86SE5 291 aaKnown RBP18.2■□□□□ 0.5
PRKN-203ENST00000366894 RPAP3Q9H6T3 665 aaPredicted RBP18.2■□□□□ 0.5
PRKN-203ENST00000366894 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 GABRQQ9UN88 632 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 SZT2Q5T011 3432 aa18.2■□□□□ 0.5
PRKN-203ENST00000366894 HAND2P61296 217 aa18.19■□□□□ 0.5
PRKN-203ENST00000366894 KRT32Q14532 448 aa18.19■□□□□ 0.5
PRKN-203ENST00000366894 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
PRKN-203ENST00000366894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.19■□□□□ 0.54e-10■■■■□ 21.6
PRKN-203ENST00000366894 RLFQ13129 1914 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms