RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 ZNF408Q9H9D4 720 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 RBM28Q9NW13 759 aaKnown RBP12.59□□□□□ -0.39
H3F3A-202ENST00000366814 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 TACC3Q9Y6A5 838 aa12.59□□□□□ -0.39
H3F3A-202ENST00000366814 CTAGE5O15320 804 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 DEXIO95424 95 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 IL1R1P14778 569 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 PLCG2P16885 1265 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 XBP1P17861 261 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 DEFB115Q30KQ5 88 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 KRT40Q6A162 431 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 KRT26Q7Z3Y9 468 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 FANCBQ8NB91 859 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 CLSTN2Q9H4D0 955 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 MCM9Q9NXL9 1143 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 MROH7-TTC4A0A0A0MT08 1334 aa12.58□□□□□ -0.4
H3F3A-202ENST00000366814 MYH2Q9UKX2 1941 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 KINO60870 393 aaKnown RBP12.57□□□□□ -0.4
H3F3A-202ENST00000366814 CELF2O95319 508 aaKnown RBP12.57□□□□□ -0.4
H3F3A-202ENST00000366814 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
H3F3A-202ENST00000366814 SEC23AQ15436 765 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 CCDC178Q5BJE1 867 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 CST9Q5W186 159 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 KIAA0825Q8IV33 1275 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 CCAR1Q8IX12 1150 aaKnown RBP12.57□□□□□ -0.4
H3F3A-202ENST00000366814 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
H3F3A-202ENST00000366814 HDAC9Q9UKV0 1011 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 CYP2D7A0A087X1C5 515 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 DDAH1O94760 285 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 PPP4CP60510 307 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 ENAHQ8N8S7 591 aaPredicted RBP12.57□□□□□ -0.4
H3F3A-202ENST00000366814 ZNF287Q9HBT7 754 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 GGA3Q9NZ52 723 aa12.57□□□□□ -0.4
H3F3A-202ENST00000366814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
H3F3A-202ENST00000366814 CNTNAP1P78357 1384 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 A0A1W2PQ27 194 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 A0A1W2PQ64 194 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 A0A1W2PQD8 194 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 TSPY2A6NKD2 308 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 NR1I2O75469 434 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 MMP14P50281 582 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 CAMK4Q16566 473 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
H3F3A-202ENST00000366814 ADALQ6DHV7 355 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 SASS6Q6UVJ0 657 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 RNF26Q9BY78 433 aaPredicted RBP12.56□□□□□ -0.4
H3F3A-202ENST00000366814 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 NAV1Q8NEY1 1877 aa12.56□□□□□ -0.4
H3F3A-202ENST00000366814 ASTN2O75129 1339 aaPredicted RBP12.56□□□□□ -0.4
H3F3A-202ENST00000366814 SPTLC2O15270 562 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 PRDM1O75626 825 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 CAVIN2O95810 425 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 VEGFBP49765 207 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 HS1BP3Q53T59 392 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 ANO1Q5XXA6 986 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 DLK2Q6UY11 383 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 CRACR2BQ8N4Y2 399 aaPredicted RBP12.55□□□□□ -0.4
H3F3A-202ENST00000366814 LINC00301Q8NCQ3 95 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
H3F3A-202ENST00000366814 PDLIM2Q96JY6 352 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 FUCA2Q9BTY2 467 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 FTOQ9C0B1 505 aaKnown RBP eCLIP12.55□□□□□ -0.4
H3F3A-202ENST00000366814 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 ZNF646O15015 1829 aaPredicted RBP12.55□□□□□ -0.4
H3F3A-202ENST00000366814 RASSF10A6NK89 507 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 ADM5C9JUS6 153 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 F8W031 263 aaPredicted RBP12.55□□□□□ -0.4
H3F3A-202ENST00000366814 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.42e-16■□□□□ 10.4
H3F3A-202ENST00000366814 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 MFSD14BQ5SR56 506 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
H3F3A-202ENST00000366814 FSIP1Q8NA03 581 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 CTCFLQ8NI51 663 aaPredicted RBP12.55□□□□□ -0.4
H3F3A-202ENST00000366814 AIFM3Q96NN9 605 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 MKNK2Q9HBH9 465 aa12.55□□□□□ -0.4
H3F3A-202ENST00000366814 MYH6P13533 1939 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 ROBO3Q96MS0 1386 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 MMP1P03956 469 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 TYRO3Q06418 890 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 GRM1Q13255 1194 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 CERS5Q8N5B7 392 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
H3F3A-202ENST00000366814 GJB4Q9NTQ9 266 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 SUGT1Q9Y2Z0 365 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 CLIC4Q9Y696 253 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 FAM205AQ6ZU69 1335 aa12.54□□□□□ -0.4
H3F3A-202ENST00000366814 KIF5BP33176 963 aa12.53□□□□□ -0.4
H3F3A-202ENST00000366814 BTDP43251 543 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms