RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 C12orf60Q5U649 245 aa19.9■□□□□ 0.78
TRIM11-202ENST00000366699 FAM196AQ6ZSG2 479 aa19.9■□□□□ 0.78
TRIM11-202ENST00000366699 PDILTQ8N807 584 aa19.9■□□□□ 0.78
TRIM11-202ENST00000366699 SPATA20Q8TB22 786 aa19.9■□□□□ 0.78
TRIM11-202ENST00000366699 RPGRQ92834 1020 aaKnown RBP19.9■□□□□ 0.78
TRIM11-202ENST00000366699 NFE2L3Q9Y4A8 694 aa19.9■□□□□ 0.78
TRIM11-202ENST00000366699 hCG_1642624A0A1W2PR95 340 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 PRR29P0C7W0 189 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 CDK11BP21127 795 aaKnown RBP19.89■□□□□ 0.77
TRIM11-202ENST00000366699 PFKFB3Q16875 520 aaPredicted RBP19.89■□□□□ 0.77
TRIM11-202ENST00000366699 SYT10Q6XYQ8 523 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 AMIGO3Q86WK7 504 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 ZNF287Q9HBT7 754 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 JAG2Q9Y219 1238 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 NMT2O60551 498 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 ZNF18P17022 549 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 CALML3P27482 149 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 GNAQP50148 359 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 TTC38Q5R3I4 469 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 HOMER1Q86YM7 354 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 SHISA4Q96DD7 197 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 GJD4Q96KN9 370 aaPredicted RBP19.89■□□□□ 0.77
TRIM11-202ENST00000366699 PYM1Q9BRP8 204 aaKnown RBP19.89■□□□□ 0.77
TRIM11-202ENST00000366699 MKNK2Q9HBH9 465 aa19.89■□□□□ 0.77
TRIM11-202ENST00000366699 TMEM232C9JQI7 657 aa19.88■□□□□ 0.77
TRIM11-202ENST00000366699 PPP4CP60510 307 aa19.88■□□□□ 0.77
TRIM11-202ENST00000366699 TFAP4Q01664 338 aa19.88■□□□□ 0.77
TRIM11-202ENST00000366699 USP17L8P0C7I0 530 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 ERCC5P28715 1186 aaPredicted RBP19.87■□□□□ 0.77
TRIM11-202ENST00000366699 ETF1P62495 437 aaKnown RBP19.87■□□□□ 0.77
TRIM11-202ENST00000366699 ANKS1AQ92625 1134 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 TNFRSF25Q93038 417 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 INTS13Q9NVM9 706 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 MKRN1Q9UHC7 482 aaKnown RBP19.87■□□□□ 0.77
TRIM11-202ENST00000366699 ARHGAP6O43182 974 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 ST5P78524 1137 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 FMR1Q06787 632 aaKnown RBP eCLIP19.87■□□□□ 0.775e-8■□□□□ 10.1
TRIM11-202ENST00000366699 ZNF397Q8NF99 534 aaPredicted RBP19.87■□□□□ 0.77
TRIM11-202ENST00000366699 SH3GLB2Q9NR46 395 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 OGFRQ9NZT2 677 aa19.87■□□□□ 0.77
TRIM11-202ENST00000366699 SPDYE4A6NLX3 237 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 ZSCAN12O43309 604 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 SLFN14P0C7P3 912 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 TBX2Q13207 712 aaPredicted RBP19.86■□□□□ 0.77
TRIM11-202ENST00000366699 USP49Q70CQ1 688 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 PHLPP2Q6ZVD8 1323 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 ROBO3Q96MS0 1386 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 ATP2B4P23634 1241 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 PLCD1P51178 756 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
TRIM11-202ENST00000366699 SPECC1LQ69YQ0 1117 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 GRAMD1CQ8IYS0 662 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 ZNF444Q8N0Y2 327 aaPredicted RBP19.86■□□□□ 0.77
TRIM11-202ENST00000366699 TCP11L1Q9NUJ3 509 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 PRDM4Q9UKN5 801 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 CCDC88AQ3V6T2 1871 aa19.86■□□□□ 0.77
TRIM11-202ENST00000366699 LAMB1P07942 1786 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 FAM205CA6NFA0 338 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 ATP2C1P98194 919 aaPredicted RBP19.85■□□□□ 0.77
TRIM11-202ENST00000366699 EVX2Q03828 476 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 CCDC93Q567U6 631 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 EARS2Q5JPH6 523 aaKnown RBP19.85■□□□□ 0.77
TRIM11-202ENST00000366699 RCSD1Q6JBY9 416 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 SH3RF3Q8TEJ3 882 aaPredicted RBP19.85■□□□□ 0.77
TRIM11-202ENST00000366699 DHX58Q96C10 678 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 RBM17Q96I25 401 aaKnown RBP19.85■□□□□ 0.77
TRIM11-202ENST00000366699 ZNF174Q15697 407 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 NPY5RQ15761 445 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 PRR5LQ6MZQ0 368 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 PNMA1Q8ND90 353 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
TRIM11-202ENST00000366699 BCL11BQ9C0K0 894 aaPredicted RBP19.85■□□□□ 0.77
TRIM11-202ENST00000366699 TSPY3P0CV98 308 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 TSPY8P0CW00 308 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 ZNF827Q17R98 1081 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 SYMPKQ92797 1274 aaKnown RBP19.84■□□□□ 0.77
TRIM11-202ENST00000366699 EP400Q96L91 3159 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 HSP90AA4PQ58FG1 418 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 SLF2Q8IX21 1173 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 PRDM10Q9NQV6 1147 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 LY75O60449 1722 aa19.84■□□□□ 0.77
TRIM11-202ENST00000366699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.83■□□□□ 0.77
TRIM11-202ENST00000366699 STX10O60499 249 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 PLCG2P16885 1265 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 PTGDRQ13258 359 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 PIK3AP1Q6ZUJ8 805 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 SH3RF1Q7Z6J0 888 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 TMEM139Q8IV31 216 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 TRMT44Q8IYL2 757 aaKnown RBP19.83■□□□□ 0.77
TRIM11-202ENST00000366699 EPSTI1Q96J88 318 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 BAG1Q99933 345 aaPredicted RBP19.83■□□□□ 0.77
TRIM11-202ENST00000366699 DDX41Q9UJV9 622 aaKnown RBP19.83■□□□□ 0.77
TRIM11-202ENST00000366699 GGA1Q9UJY5 639 aa19.83■□□□□ 0.77
TRIM11-202ENST00000366699 TNRC6CQ9HCJ0 1690 aaKnown RBP19.83■□□□□ 0.77
TRIM11-202ENST00000366699 GOLGA6L9A6NEM1 432 aa19.83■□□□□ 0.76
TRIM11-202ENST00000366699 ELF2Q15723 593 aa19.83■□□□□ 0.76
TRIM11-202ENST00000366699 CRY2Q49AN0 593 aa19.83■□□□□ 0.76
TRIM11-202ENST00000366699 REXO1L1PQ8IX06 675 aa19.83■□□□□ 0.76
TRIM11-202ENST00000366699 FAM177A1Q8N128 213 aaPredicted RBP19.83■□□□□ 0.76
TRIM11-202ENST00000366699 GSDMAQ96QA5 445 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms