RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 FBXL18Q96ME1 805 aa5.28□□□□□ -1.56
RNU4-48P-201ENST00000365559 TINF2Q9BSI4 451 aa5.28□□□□□ -1.56
RNU4-48P-201ENST00000365559 ASPNQ9BXN1 380 aa5.28□□□□□ -1.56
RNU4-48P-201ENST00000365559 CAPN10Q9HC96 672 aa5.28□□□□□ -1.56
RNU4-48P-201ENST00000365559 ATP13A1Q9HD20 1204 aa5.28□□□□□ -1.56
RNU4-48P-201ENST00000365559 ATF4P18848 351 aaPredicted RBP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 ZYXQ15942 572 aaKnown RBP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 NBPF12Q5TAG4 269 aaPredicted RBP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 INTS3Q68E01 1043 aaKnown RBP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 PIWIL2Q8TC59 973 aaKnown RBP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 ASB11Q8WXH4 323 aa5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 UBE2FQ969M7 185 aa5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 SEC16BQ96JE7 1060 aa5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 SLC6A18Q96N87 628 aa5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 TM9SF2Q99805 663 aa5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 SRRTQ9BXP5 876 aaKnown RBP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 DUSP15Q9H1R2 295 aaPredicted RBP5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 ZSWIM5Q9P217 1185 aa5.27□□□□□ -1.57
RNU4-48P-201ENST00000365559 CLEC3AO75596 197 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 SRFP11831 508 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 CCNFP41002 786 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 GIPRP48546 466 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 EIF6P56537 245 aaKnown RBP5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 CHMP4BP1P59074 171 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 IKZF1Q13422 519 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 THAP5Q7Z6K1 395 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 TAB3Q8N5C8 712 aaPredicted RBP5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 SHDQ96IW2 340 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 CRBNQ96SW2 442 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 KCNH3Q9ULD8 1083 aa5.26□□□□□ -1.57
RNU4-48P-201ENST00000365559 SHISA3A0PJX4 238 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 FUT4P22083 530 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 GUCY2CP25092 1073 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 RNF4P78317 190 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 PLCL1Q15111 1095 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 ANGEL2Q5VTE6 544 aaKnown RBP5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 UNC5AQ6ZN44 842 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 AGBL5Q8NDL9 886 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 CPLX3Q8WVH0 158 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 GPR62Q9BZJ7 368 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 PRDM7Q9NQW5 492 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 ADAMTS6Q9UKP5 1117 aa5.25□□□□□ -1.57
RNU4-48P-201ENST00000365559 C9IYK1 514 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 ZP2Q05996 745 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 SNW1Q13573 536 aaKnown RBP5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 GNL2Q13823 731 aaKnown RBP5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 GAB4Q2WGN9 574 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 NBPF9Q3BBW0 867 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 TMC3Q7Z5M5 1100 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 TTC6Q86TZ1 520 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 PPFIBP1Q86W92 1011 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 FAM169BQ8N8A8 192 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 ANAPC16Q96DE5 110 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 CARS2Q9HA77 564 aaKnown RBP5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 MBNL3Q9NUK0 354 aaKnown RBP5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 SUCOQ9UBS9 1254 aaKnown RBP5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 ADGRE2Q9UHX3 823 aa5.24□□□□□ -1.57
RNU4-48P-201ENST00000365559 LTBP3Q9NS15 1303 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 A0A1W2PQH9 124 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 ESR1P03372 595 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 RNASE1P07998 156 aaKnown RBP5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 TPP2P29144 1249 aaPredicted RBP5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 ZNF792Q3KQV3 632 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 TDRD10Q5VZ19 366 aaKnown RBP5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 CBLL1Q75N03 491 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 TSPYL5Q86VY4 417 aaPredicted RBP5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 VPS37DQ86XT2 251 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 OR6P1Q8NGX9 317 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 PI4K2BQ8TCG2 481 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 DHRS1Q96LJ7 313 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 PRDM14Q9GZV8 571 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 MKRN2Q9H000 416 aaKnown RBP5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 TRIT1Q9H3H1 467 aaKnown RBP5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 FAM86C1Q9NVL1 165 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 GPATCH2Q9NW75 528 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 STRIP2Q9ULQ0 834 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 MRVI1Q9Y6F6 885 aa5.23□□□□□ -1.57
RNU4-48P-201ENST00000365559 FGRP09769 529 aa5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 DNAJA1P31689 397 aaKnown RBP5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 PMS1P54277 932 aaKnown RBP5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 ARID5AQ03989 594 aa5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 NMIQ13287 307 aaPredicted RBP5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 SLC23A3Q6PIS1 610 aa5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 TMPRSS7Q7RTY8 843 aa5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 MCF2L2Q86YR7 1114 aa5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 CREG2Q8IUH2 290 aa5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 C19orf47Q8N9M1 422 aaKnown RBP5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 LMCD1Q9NZU5 365 aa5.22□□□□□ -1.57
RNU4-48P-201ENST00000365559 SHOXO15266 292 aa5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 TP53P04637 393 aaPredicted RBP5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 SSBP05455 408 aaKnown RBP eCLIP5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 ZC3H6P61129 1189 aaKnown RBP5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 AUHQ13825 339 aaKnown RBP5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 PPP2R5EQ16537 467 aa5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 AXDND1Q5T1B0 1012 aaPredicted RBP5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 CCDC144CPQ8IYA2 1237 aa5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 SLC43A3Q8NBI5 491 aa5.21□□□□□ -1.58
RNU4-48P-201ENST00000365559 LRRN4CLQ8ND94 238 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms