RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SELENOSQ9BQE4 189 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 C6orf50Q9HD87 102 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 RNF40O75150 1001 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 CDC27P30260 824 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 SCARF1Q14162 830 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 ALKQ9UM73 1620 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 CPS1P31327 1500 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 MYO1CO00159 1063 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 SH2B2O14492 632 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-201ENST00000361866 CTDNEP1O95476 244 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 NBPF5PQ86XG9 351 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-201ENST00000361866 PDE8BO95263 885 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 KRT13P13646 458 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 MKRN1Q9UHC7 482 aaKnown RBP15.53■□□□□ 0.08
COL6A1-201ENST00000361866 GOLGA6L10A0A0M3HER8 536 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 INF2Q27J81 1249 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 DCAF17Q5H9S7 520 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-201ENST00000361866 SV2BQ7L1I2 683 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 CCDC51Q96ER9 411 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 HAUS4Q9H6D7 363 aa15.53■□□□□ 0.08
COL6A1-201ENST00000361866 CYP2D7A0A087X1C5 515 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 SRGAP2O75044 1071 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 MMP1P03956 469 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 SLFN14P0C7P3 912 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 ERCC5P28715 1186 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-201ENST00000361866 ADD2P35612 726 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 CTSWP56202 376 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 CYB5R4Q7L1T6 521 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 B4DLN1 442 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 SAMM50Q9Y512 469 aa15.52■□□□□ 0.08
COL6A1-201ENST00000361866 TADA3O75528 432 aa15.52■□□□□ 0.07
COL6A1-201ENST00000361866 GBP2P32456 591 aaPredicted RBP15.52■□□□□ 0.07
COL6A1-201ENST00000361866 E2F4Q16254 413 aa15.52■□□□□ 0.07
COL6A1-201ENST00000361866 TSGA10IPQ3SY00 556 aa15.52■□□□□ 0.07
COL6A1-201ENST00000361866 FAM71BQ8TC56 605 aa15.52■□□□□ 0.07
COL6A1-201ENST00000361866 SELENOOQ9BVL4 669 aa15.52■□□□□ 0.07
COL6A1-201ENST00000361866 PPANQ9NQ55 473 aaKnown RBP15.52■□□□□ 0.07
COL6A1-201ENST00000361866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.52■□□□□ 0.07
COL6A1-201ENST00000361866 ATP8B1O43520 1251 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 NBPF14Q5TI25 921 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 NYAP1Q6ZVC0 841 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 PIH1D3Q9NQM4 214 aaKnown RBP15.51■□□□□ 0.07
COL6A1-201ENST00000361866 RPN1P04843 607 aaKnown RBP15.51■□□□□ 0.07
COL6A1-201ENST00000361866 MCAMP43121 646 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 TFAP4Q01664 338 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 CCDC25Q86WR0 208 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 ZBTB38Q8NAP3 1195 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-201ENST00000361866 EXOC4Q96A65 974 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 ZNF609O15014 1411 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 TMEM110-MUSTN1A8MSY1 372 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 FDPSP14324 419 aaKnown RBP15.51■□□□□ 0.07
COL6A1-201ENST00000361866 ARID4AP29374 1257 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-201ENST00000361866 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-201ENST00000361866 UBE3CQ15386 1083 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 OXER1Q8TDS5 423 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 GSDMAQ96QA5 445 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 GPR108Q9NPR9 543 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 ASAP1Q9ULH1 1129 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 MED23Q9ULK4 1368 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 CEP104O60308 925 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 IFNAR1P17181 557 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 NF2P35240 595 aa15.51■□□□□ 0.07
COL6A1-201ENST00000361866 PPRC1Q5VV67 1664 aaKnown RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 LDHCP07864 332 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 GOLGA8HP0CJ92 632 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 EXOSC10Q01780 885 aaKnown RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 PPFIA1Q13136 1202 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 GBP6Q6ZN66 633 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 NOX5Q96PH1 765 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 SLC39A2Q9NP94 309 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 FMNL1O95466 1100 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 GNA11P29992 359 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 RESP18Q5W5W9 173 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 CABP7Q86V35 215 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 GSPT2Q8IYD1 628 aaKnown RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 ZSCAN10Q96SZ4 725 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 TSGA10Q9BZW7 698 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 FOXP1Q9H334 677 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 CAPN7Q9Y6W3 813 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 ERBB3P21860 1342 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 A2ML1A8K2U0 1454 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 TNNC1P63316 161 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 METTL16Q86W50 562 aaKnown RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 ARFGAP2Q8N6H7 521 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 RRP36Q96EU6 259 aaKnown RBP15.5■□□□□ 0.07
COL6A1-201ENST00000361866 FBXO3Q9UK99 471 aa15.5■□□□□ 0.07
COL6A1-201ENST00000361866 ADGRB1O14514 1584 aa15.49■□□□□ 0.07
COL6A1-201ENST00000361866 TRIM66O15016 1216 aa15.49■□□□□ 0.07
COL6A1-201ENST00000361866 SYCP3Q8IZU3 236 aa15.49■□□□□ 0.07
COL6A1-201ENST00000361866 LCORLQ8N3X6 602 aa15.49■□□□□ 0.07
COL6A1-201ENST00000361866 LRRN4CLQ8ND94 238 aa15.49■□□□□ 0.07
COL6A1-201ENST00000361866 MED4Q9NPJ6 270 aa15.49■□□□□ 0.07
COL6A1-201ENST00000361866 USP42Q9H9J4 1324 aaKnown RBP15.49■□□□□ 0.07
COL6A1-201ENST00000361866 PARP1P09874 1014 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms