RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 PPP2R2AP63151 447 aa7.03□□□□□ -1.28
RPL39-201ENST00000361575 GRIK4Q16099 956 aa7.03□□□□□ -1.28
RPL39-201ENST00000361575 NBPF12Q5TAG4 269 aaPredicted RBP7.03□□□□□ -1.28
RPL39-201ENST00000361575 Q6ZS46 218 aa7.03□□□□□ -1.28
RPL39-201ENST00000361575 SMARCC1Q92922 1105 aaPredicted RBP7.03□□□□□ -1.28
RPL39-201ENST00000361575 CLUHP3Q96NS8 147 aa7.03□□□□□ -1.28
RPL39-201ENST00000361575 PSMG3-AS1Q96PY0 264 aa7.03□□□□□ -1.28
RPL39-201ENST00000361575 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.03□□□□□ -1.28
RPL39-201ENST00000361575 PIDD1Q9HB75 910 aa7.03□□□□□ -1.28
RPL39-201ENST00000361575 PLAAQ9Y263 795 aa7.03□□□□□ -1.28
RPL39-201ENST00000361575 DYNC1LI2O43237 492 aaPredicted RBP7.02□□□□□ -1.29
RPL39-201ENST00000361575 WFS1O76024 890 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 LRIG2O94898 1065 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 IBSPP21815 317 aaPredicted RBP7.02□□□□□ -1.29
RPL39-201ENST00000361575 PABPC4Q13310 644 aaKnown RBP eCLIP7.02□□□□□ -1.292e-7■■■■■ 29.6
RPL39-201ENST00000361575 ZC3H12BQ5HYM0 836 aaKnown RBP7.02□□□□□ -1.29
RPL39-201ENST00000361575 ANKRD34AQ69YU3 496 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 HEATR6Q6AI08 1181 aaKnown RBP7.02□□□□□ -1.29
RPL39-201ENST00000361575 CDPF1Q6NVV7 123 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 FDX2Q6P4F2 183 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 THNSL2Q86YJ6 484 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.02□□□□□ -1.29
RPL39-201ENST00000361575 SVOPQ8N4V2 548 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 NINJ1Q92982 152 aa7.02□□□□□ -1.29
RPL39-201ENST00000361575 NCOA5Q9HCD5 579 aaKnown RBP7.02□□□□□ -1.29
RPL39-201ENST00000361575 MRPS23Q9Y3D9 190 aaKnown RBP7.02□□□□□ -1.29
RPL39-201ENST00000361575 A0A087X0B3 334 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.01□□□□□ -1.29
RPL39-201ENST00000361575 SLITRK5O94991 958 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 RAPGEF3O95398 923 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 ANAPC15P60006 121 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 TRIM28Q13263 835 aaKnown RBP7.01□□□□□ -1.29
RPL39-201ENST00000361575 ANKRD39Q53RE8 183 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 KRT26Q7Z3Y9 468 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 DHX37Q8IY37 1157 aaKnown RBP7.01□□□□□ -1.29
RPL39-201ENST00000361575 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 OSBP2Q969R2 916 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 MRGPRX3Q96LB0 322 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 KREMEN1Q96MU8 473 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 APBA2Q99767 749 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 TMX1Q9H3N1 280 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 SEMA6CQ9H3T2 930 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 PCOLCE2Q9UKZ9 415 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 CEP131Q9UPN4 1083 aa7.01□□□□□ -1.29
RPL39-201ENST00000361575 IRS4O14654 1257 aaPredicted RBP7□□□□□ -1.29
RPL39-201ENST00000361575 RFPL3O75679 317 aa7□□□□□ -1.29
RPL39-201ENST00000361575 CD247P20963 164 aa7□□□□□ -1.29
RPL39-201ENST00000361575 LORP23490 312 aaPredicted RBP7□□□□□ -1.29
RPL39-201ENST00000361575 SEZ6L2Q6UXD5 910 aa7□□□□□ -1.29
RPL39-201ENST00000361575 NIM1KQ8IY84 436 aa7□□□□□ -1.29
RPL39-201ENST00000361575 C7orf61Q8IZ16 206 aa7□□□□□ -1.29
RPL39-201ENST00000361575 MFSD2AQ8NA29 543 aa7□□□□□ -1.29
RPL39-201ENST00000361575 LRRN4CLQ8ND94 238 aa7□□□□□ -1.29
RPL39-201ENST00000361575 MFSD3Q96ES6 412 aa7□□□□□ -1.29
RPL39-201ENST00000361575 UBL7Q96S82 380 aaPredicted RBP7□□□□□ -1.29
RPL39-201ENST00000361575 AARSD1Q9BTE6 412 aaKnown RBP7□□□□□ -1.29
RPL39-201ENST00000361575 DHRS4Q9BTZ2 278 aa7□□□□□ -1.29
RPL39-201ENST00000361575 KLHL42Q9P2K6 505 aa7□□□□□ -1.29
RPL39-201ENST00000361575 CNTNAP4Q9C0A0 1308 aa7□□□□□ -1.29
RPL39-201ENST00000361575 TRAV20A0A0B4J274 112 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 FAM83GA6ND36 823 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 SPDYE3A6NKU9 549 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 KCNQ2O43526 872 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 C6orf222P0C671 652 aaPredicted RBP6.99□□□□□ -1.29
RPL39-201ENST00000361575 RAB6AP20340 208 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 AUHQ13825 339 aaKnown RBP6.99□□□□□ -1.29
RPL39-201ENST00000361575 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
RPL39-201ENST00000361575 LETMD1Q6P1Q0 360 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 CDH24Q86UP0 819 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 FAM46AQ96IP4 442 aaKnown RBP6.99□□□□□ -1.29
RPL39-201ENST00000361575 MIPEPQ99797 713 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 MKRN2Q9H000 416 aaKnown RBP6.99□□□□□ -1.29
RPL39-201ENST00000361575 AKTIPQ9H8T0 292 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 GP6Q9HCN6 339 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 SSU72Q9NP77 194 aaKnown RBP6.99□□□□□ -1.29
RPL39-201ENST00000361575 ENAMQ9NRM1 1142 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 MKL2Q9ULH7 1088 aa6.99□□□□□ -1.29
RPL39-201ENST00000361575 TRBV23-1A0A0A0MS06 115 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 CCDC163A0A0D9SF12 145 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 AGRPO00253 132 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 PLD2O14939 933 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 NFICP08651 508 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 NAT2P11245 290 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 FGFR1P11362 822 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 PABPC1P11940 636 aaKnown RBP6.98□□□□□ -1.29
RPL39-201ENST00000361575 STAT3P40763 770 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 SNW1Q13573 536 aaKnown RBP6.98□□□□□ -1.29
RPL39-201ENST00000361575 SGO2Q562F6 1265 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 ADCY4Q8NFM4 1077 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 FBLIM1Q8WUP2 373 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 EZH1Q92800 747 aaPredicted RBP6.98□□□□□ -1.29
RPL39-201ENST00000361575 ZNF775Q96BV0 537 aaPredicted RBP6.98□□□□□ -1.29
RPL39-201ENST00000361575 LGR6Q9HBX8 967 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 DDX56Q9NY93 547 aaKnown RBP6.98□□□□□ -1.29
RPL39-201ENST00000361575 WHRNQ9P202 907 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 EMC9Q9Y3B6 208 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 DAGLAQ9Y4D2 1042 aa6.98□□□□□ -1.29
RPL39-201ENST00000361575 PRODHO43272 600 aa6.97□□□□□ -1.29
RPL39-201ENST00000361575 MYCLP1P12525 358 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms