RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 ADM5C9JUS6 153 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 F5H6K3 240 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 NDUFB10O96000 172 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 PDHBP11177 359 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 KLRC3Q07444 240 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 SART3Q15020 963 aaKnown RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 UBE2SQ16763 222 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 ISM2Q6H9L7 571 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 POTEEQ6S8J3 1075 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 SYNE3Q6ZMZ3 975 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 GRAMD1CQ8IYS0 662 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 DEFB129Q9H1M3 183 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 TMEM60Q9H2L4 133 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 BCAS3Q9H6U6 928 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 JMJD4Q9H9V9 463 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 LY75O60449 1722 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 DHX16O60231 1041 aaKnown RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 NR1I2O75469 434 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 HMGN5P82970 282 aaKnown RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 SSRP1Q08945 709 aaKnown RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 CERKLQ49MI3 558 aaPredicted RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 C9orf131Q5VYM1 1079 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 PIK3AP1Q6ZUJ8 805 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 CATIPQ7Z7H3 387 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 OGFOD1Q8N543 542 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 SUPT20HQ8NEM7 779 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 CTCFLQ8NI51 663 aaPredicted RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 LRRC15Q8TF66 581 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 FAM151AQ8WW52 585 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 PURBQ96QR8 312 aaKnown RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 GGA3Q9NZ52 723 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 WDR19Q8NEZ3 1342 aa3.32□□□□□ -1.88
LTN1-201ENST00000361371 DDX60Q8IY21 1712 aaKnown RBP3.32□□□□□ -1.88
LTN1-201ENST00000361371 GRM4Q14833 912 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 JAKMIP3Q5VZ66 844 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 SHC4Q6S5L8 630 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ARID3AQ99856 593 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 LLPHQ9BRT6 129 aaKnown RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 PHF20Q9BVI0 1012 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ATRNL1Q5VV63 1379 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L15C9J2P7 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L13C9JLJ4 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L11C9JVI0 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L18D6R9N7 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L22D6RA61 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L17D6RBQ6 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L19D6RCP7 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L20D6RJB6 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 PRPF3O43395 683 aaKnown RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 MMP1P03956 469 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L24Q0WX57 530 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 PTPN21Q16825 1174 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 USP17L6PQ6QN14 398 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 WNK4Q96J92 1243 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 PI4KBQ9UBF8 816 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 NUP98P52948 1817 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ENTPD3O75355 529 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 PLCG2P16885 1265 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 UBXN2AP68543 259 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 KRT85P78386 507 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ICA1Q05084 483 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 SLFN13Q68D06 897 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 HEATR3Q7Z4Q2 680 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ENGASEQ8NFI3 743 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 EPSTI1Q96J88 318 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 PLIN2Q99541 437 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.31□□□□□ -1.88
LTN1-201ENST00000361371 POLD4Q9HCU8 107 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ROBO3Q96MS0 1386 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 OPLAHO14841 1288 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 SCG2P13521 617 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ANKS1AQ92625 1134 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 MAP3K14Q99558 947 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 BIN2Q9UBW5 565 aaPredicted RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 DDX11L8A8MPP1 907 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 PHF20L1A8MW92 1017 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 TMEM232C9JQI7 657 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 U2AF2P26368 475 aaKnown RBP eCLIP3.31□□□□□ -1.883e-6■■■■■ 27
LTN1-201ENST00000361371 ME1P48163 572 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ZNF280AP59817 542 aaPredicted RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 HDLBPQ00341 1268 aaKnown RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 ZNF543Q08ER8 600 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 IL17AQ16552 155 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ANO1Q5XXA6 986 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 NOSTRINQ8IVI9 506 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 MKL1Q969V6 931 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 MRIQ9BWK5 157 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 BIN1O00499 593 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ECM2O94769 699 aaPredicted RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 DEXIO95424 95 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 INF2Q27J81 1249 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ABCB5Q2M3G0 1257 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 QRICH1Q2TAL8 776 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 KIF4BQ2VIQ3 1234 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 MAP1SQ66K74 1059 aaPredicted RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 AGBL3Q8NEM8 1001 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 BICD2Q8TD16 824 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 ZNF526Q8TF50 670 aaPredicted RBP3.31□□□□□ -1.88
LTN1-201ENST00000361371 CLMNQ96JQ2 1002 aa3.31□□□□□ -1.88
LTN1-201ENST00000361371 SUGT1Q9Y2Z0 365 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms