RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 WNT7AO00755 349 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 PPEF1O14829 653 aaPredicted RBP25.86■■□□□ 1.73
LDB1-201ENST00000361198 TSPY3P0CV98 308 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 TSPY8P0CW00 308 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 SKILP12757 684 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 KIF5BP33176 963 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 CCZ1BP86790 482 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 CCZ1P86791 482 aaPredicted RBP25.86■■□□□ 1.73
LDB1-201ENST00000361198 ZNF444Q8N0Y2 327 aaPredicted RBP25.86■■□□□ 1.73
LDB1-201ENST00000361198 OSBPL5Q9H0X9 879 aaPredicted RBP25.86■■□□□ 1.73
LDB1-201ENST00000361198 BRMS1Q9HCU9 246 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 FOXN1O15353 648 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 PFKFB3Q16875 520 aaPredicted RBP25.86■■□□□ 1.73
LDB1-201ENST00000361198 CERS3Q8IU89 383 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 SP8Q8IXZ3 490 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 TEX11Q8IYF3 940 aa25.86■■□□□ 1.73
LDB1-201ENST00000361198 ANKRD31Q8N7Z5 1873 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 POLR2DO15514 142 aaKnown RBP25.85■■□□□ 1.73
LDB1-201ENST00000361198 GSDMDP57764 484 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 STAG2Q8N3U4 1231 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 CSRNP2Q9H175 543 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 IMPACTQ9P2X3 320 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 LRRC37AA6NMS7 1700 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 RASA1P20936 1047 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 RHBDL3P58872 404 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 MDM2Q00987 491 aaPredicted RBP25.85■■□□□ 1.73
LDB1-201ENST00000361198 NCAPHQ15003 741 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 USP49Q70CQ1 688 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 TBC1D22AQ8WUA7 517 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 FAM163AQ96GL9 167 aaPredicted RBP25.85■■□□□ 1.73
LDB1-201ENST00000361198 PCDHA5Q9Y5H7 936 aa25.85■■□□□ 1.73
LDB1-201ENST00000361198 NYAP1Q6ZVC0 841 aa25.84■■□□□ 1.73
LDB1-201ENST00000361198 FILIP1Q7Z7B0 1213 aa25.84■■□□□ 1.73
LDB1-201ENST00000361198 TCP11L1Q9NUJ3 509 aa25.84■■□□□ 1.73
LDB1-201ENST00000361198 TMC4Q7Z404 712 aa25.84■■□□□ 1.73
LDB1-201ENST00000361198 COL23A1Q86Y22 540 aaPredicted RBP25.84■■□□□ 1.73
LDB1-201ENST00000361198 ELOA2Q8IYF1 753 aaPredicted RBP25.84■■□□□ 1.73
LDB1-201ENST00000361198 FLT1P17948 1338 aa25.83■■□□□ 1.73
LDB1-201ENST00000361198 RIMBP2O15034 1052 aa25.83■■□□□ 1.73
LDB1-201ENST00000361198 NLRP5P59047 1200 aa25.83■■□□□ 1.73
LDB1-201ENST00000361198 GTF2IP78347 998 aa25.83■■□□□ 1.73
LDB1-201ENST00000361198 ATP6V0A2Q9Y487 856 aa25.83■■□□□ 1.73
LDB1-201ENST00000361198 MORC2Q9Y6X9 1032 aaPredicted RBP25.83■■□□□ 1.73
LDB1-201ENST00000361198 GAKO14976 1311 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 FAM205AQ6ZU69 1335 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 CCDC178Q5BJE1 867 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 PDCL2Q8N4E4 241 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 PDILTQ8N807 584 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 SERTAD1Q9UHV2 236 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 MAD2L2Q9UI95 211 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 STX8Q9UNK0 236 aa25.83■■□□□ 1.72
LDB1-201ENST00000361198 ADAMTS3O15072 1205 aa25.82■■□□□ 1.72
LDB1-201ENST00000361198 PLCG2P16885 1265 aa25.82■■□□□ 1.72
LDB1-201ENST00000361198 OLFM4Q6UX06 510 aa25.82■■□□□ 1.72
LDB1-201ENST00000361198 NLGN1Q8N2Q7 840 aa25.82■■□□□ 1.72
LDB1-201ENST00000361198 SRGNP10124 158 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 CDK8P49336 464 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 GRM4Q14833 912 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 CEP135Q66GS9 1140 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 C16orf86Q6ZW13 317 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 SLF2Q8IX21 1173 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 ARID3AQ99856 593 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 USP27XA6NNY8 438 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 NCBP1Q09161 790 aaKnown RBP25.81■■□□□ 1.72
LDB1-201ENST00000361198 ZNF174Q15697 407 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 SMAP1Q8IYB5 467 aaPredicted RBP25.81■■□□□ 1.72
LDB1-201ENST00000361198 CCDC112Q8NEF3 446 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 AKT1S1Q96B36 256 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 TMEM47Q9BQJ4 181 aa25.81■■□□□ 1.72
LDB1-201ENST00000361198 DDX60LQ5H9U9 1706 aaKnown RBP25.8■■□□□ 1.72
LDB1-201ENST00000361198 IKBKBO14920 756 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 POSTNQ15063 836 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 PPP4R3BQ5MIZ7 849 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 TTC38Q5R3I4 469 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 ZNF287Q9HBT7 754 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 BMP6P22004 513 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 PIK3AP1Q6ZUJ8 805 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 HOOK1Q9UJC3 728 aaKnown RBP25.8■■□□□ 1.72
LDB1-201ENST00000361198 MTMR7Q9Y216 660 aa25.8■■□□□ 1.72
LDB1-201ENST00000361198 MYH1P12882 1939 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 SNED1Q8TER0 1413 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 HMGB2P26583 209 aaKnown RBP25.79■■□□□ 1.72
LDB1-201ENST00000361198 SLC35G1Q2M3R5 365 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 GPKOWQ92917 476 aaPredicted RBP eCLIP25.79■■□□□ 1.72
LDB1-201ENST00000361198 HSD3B7Q9H2F3 369 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 PLSCR1O15162 318 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 ACTN4O43707 911 aaKnown RBP25.79■■□□□ 1.72
LDB1-201ENST00000361198 PRR29P0C7W0 189 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 PTPN14Q15678 1187 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 CCAR2Q8N163 923 aaKnown RBP25.79■■□□□ 1.72
LDB1-201ENST00000361198 EPSTI1Q96J88 318 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 EYA3Q99504 573 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 COA1Q9GZY4 146 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 DAGLAQ9Y4D2 1042 aa25.79■■□□□ 1.72
LDB1-201ENST00000361198 BMP15O95972 392 aa25.78■■□□□ 1.72
LDB1-201ENST00000361198 GRAMD1CQ8IYS0 662 aa25.78■■□□□ 1.72
LDB1-201ENST00000361198 XPO4Q9C0E2 1151 aaKnown RBP25.78■■□□□ 1.72
LDB1-201ENST00000361198 CYTH3O43739 400 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 APBA3O96018 575 aa25.77■■□□□ 1.72
LDB1-201ENST00000361198 LMOD1P29536 600 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms