RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 ANKRD18AQ8IVF6 992 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 ZNF652Q9Y2D9 606 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 CNTNAP5Q8WYK1 1306 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 LOC102724428A0A0B4J2F2 783 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 SIK1P57059 783 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 RBL2Q08999 1139 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 RABGGTAQ92696 567 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 ADGRG1Q9Y653 693 aa25.43■■□□□ 1.66
CCSER2-202ENST00000359979 ORC4O43929 436 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 FECHP22830 423 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 PLA2G4AP47712 749 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 KLHL10Q6JEL2 608 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 CTR9Q6PD62 1173 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 IQUBQ8NA54 791 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 DESI2Q9BSY9 194 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 BSDC1Q9NW68 430 aaPredicted RBP25.42■■□□□ 1.66
CCSER2-202ENST00000359979 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.42■■□□□ 1.66
CCSER2-202ENST00000359979 KAT6BQ8WYB5 2073 aa25.42■■□□□ 1.66
CCSER2-202ENST00000359979 SMIM22K7EJ46 135 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 MFAP3LO75121 409 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 DYNLL1P63167 89 aaKnown RBP25.41■■□□□ 1.66
CCSER2-202ENST00000359979 ZNF174Q15697 407 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 CNGA4Q8IV77 575 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 MRPL44Q9H9J2 332 aaKnown RBP25.41■■□□□ 1.66
CCSER2-202ENST00000359979 SOWAHDA6NJG2 315 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 PTGDRQ13258 359 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 SF3B3Q15393 1217 aaKnown RBP25.41■■□□□ 1.66
CCSER2-202ENST00000359979 E2F4Q16254 413 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 TMED8Q6PL24 325 aaPredicted RBP25.41■■□□□ 1.66
CCSER2-202ENST00000359979 A0A1B0GUL6 1792 aa25.41■■□□□ 1.66
CCSER2-202ENST00000359979 WNT7AO00755 349 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 STX17P56962 302 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 CTCFLQ8NI51 663 aaPredicted RBP25.4■■□□□ 1.66
CCSER2-202ENST00000359979 CCDC12Q8WUD4 166 aaPredicted RBP25.4■■□□□ 1.66
CCSER2-202ENST00000359979 GOLGA1Q92805 767 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 COL4A1P02462 1669 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 CYP2D7A0A087X1C5 515 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 hCG_1642624A0A1W2PR95 340 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 LRRC10BA6NIK2 292 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 TUBB2AQ13885 445 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 MTF1Q14872 753 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 JAKMIP3Q5VZ66 844 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 CLEC4GQ6UXB4 293 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 RAD9BQ6WBX8 426 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 RASGRP2Q7LDG7 609 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 TUBB2BQ9BVA1 445 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 MYH2Q9UKX2 1941 aa25.4■■□□□ 1.66
CCSER2-202ENST00000359979 ITPK1Q13572 414 aa25.39■■□□□ 1.65
CCSER2-202ENST00000359979 KARSQ15046 597 aaKnown RBP25.39■■□□□ 1.65
CCSER2-202ENST00000359979 ST7Q9NRC1 585 aa25.39■■□□□ 1.65
CCSER2-202ENST00000359979 LIMA1Q9UHB6 759 aaKnown RBP25.39■■□□□ 1.65
CCSER2-202ENST00000359979 PDS5AQ29RF7 1337 aaKnown RBP25.39■■□□□ 1.65
CCSER2-202ENST00000359979 SCN7AQ01118 1682 aa25.39■■□□□ 1.65
CCSER2-202ENST00000359979 CASP1P29466 404 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 XDHP47989 1333 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 SPAG1Q07617 926 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 CC2D1AQ6P1N0 951 aaPredicted RBP25.38■■□□□ 1.65
CCSER2-202ENST00000359979 SRBD1Q8N5C6 995 aaKnown RBP25.38■■□□□ 1.65
CCSER2-202ENST00000359979 RWDD2AQ9UIY3 292 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 GTPBP6O43824 516 aaPredicted RBP25.38■■□□□ 1.65
CCSER2-202ENST00000359979 KIF5CO60282 957 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 SCG2P13521 617 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 PDXDC2PQ6P474 469 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 ZNF384Q8TF68 577 aa25.38■■□□□ 1.65
CCSER2-202ENST00000359979 FAM84BQ96KN1 310 aaPredicted RBP25.38■■□□□ 1.65
CCSER2-202ENST00000359979 USP17L12C9JPN9 530 aa25.37■■□□□ 1.65
CCSER2-202ENST00000359979 USP17L21D6R901 530 aa25.37■■□□□ 1.65
CCSER2-202ENST00000359979 TEX35Q5T0J7 233 aa25.37■■□□□ 1.65
CCSER2-202ENST00000359979 UBXN6Q9BZV1 441 aa25.37■■□□□ 1.65
CCSER2-202ENST00000359979 PFKFB3Q16875 520 aaPredicted RBP25.36■■□□□ 1.65
CCSER2-202ENST00000359979 ARL6IP4Q66PJ3 421 aaKnown RBP25.36■■□□□ 1.65
CCSER2-202ENST00000359979 SMYD4Q8IYR2 804 aaPredicted RBP25.36■■□□□ 1.65
CCSER2-202ENST00000359979 RMND1Q9NWS8 449 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 MINPP1Q9UNW1 487 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 CTNND2Q9UQB3 1225 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 GYPCP04921 128 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 CASP14P31944 242 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 TUBB4BP68371 445 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 TRIM14Q14142 442 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 NOM1Q5C9Z4 860 aaKnown RBP25.36■■□□□ 1.65
CCSER2-202ENST00000359979 FBXO33Q7Z6M2 555 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 NSUN4Q96CB9 384 aaKnown RBP25.36■■□□□ 1.65
CCSER2-202ENST00000359979 ATP8A2Q9NTI2 1148 aa25.36■■□□□ 1.65
CCSER2-202ENST00000359979 TTF2Q9UNY4 1162 aaKnown RBP25.36■■□□□ 1.65
CCSER2-202ENST00000359979 THRAP3Q9Y2W1 955 aaKnown RBP25.36■■□□□ 1.65
CCSER2-202ENST00000359979 BAZ2AQ9UIF9 1905 aaKnown RBP25.35■■□□□ 1.65
CCSER2-202ENST00000359979 TBC1D8O95759 1140 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 TXLNAP40222 546 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 NLRP5P59047 1200 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 DDB1Q16531 1140 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 TMTC1Q8IUR5 882 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 CCDC66A2RUB6 948 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 NT5C2P49902 561 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 SRGAP1Q7Z6B7 1085 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 ANKRD20A12PQ8NF67 263 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 CPLX3Q8WVH0 158 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 PARD6BQ9BYG5 372 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 CRNKL1Q9BZJ0 848 aaKnown RBP25.35■■□□□ 1.65
CCSER2-202ENST00000359979 ARFGAP3Q9NP61 516 aa25.35■■□□□ 1.65
CCSER2-202ENST00000359979 LZTFL1Q9NQ48 299 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms