RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 FAM83AQ86UY5 434 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 NOSTRINQ8IVI9 506 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 ZSCAN29Q8IWY8 852 aaPredicted RBP15.31■□□□□ 0.04
NFIX-201ENST00000358552 CCDC148Q8NFR7 591 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.31■□□□□ 0.04
NFIX-201ENST00000358552 SPZ1Q9BXG8 430 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 KANSL2Q9H9L4 492 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 TFIP11Q9UBB9 837 aaKnown RBP15.31■□□□□ 0.04
NFIX-201ENST00000358552 ECM29Q5VYK3 1845 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 A0A1W2PQ27 194 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 A0A1W2PQ64 194 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 A0A1W2PQD8 194 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 GADD45BO75293 160 aaPredicted RBP15.31■□□□□ 0.04
NFIX-201ENST00000358552 SCG2P13521 617 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 YBX3P16989 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
NFIX-201ENST00000358552 PRELPP51888 382 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 STK38Q15208 465 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 PFKFB3Q16875 520 aaPredicted RBP15.31■□□□□ 0.04
NFIX-201ENST00000358552 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 TATDN1Q6P1N9 297 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 SLC44A5Q8NCS7 719 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 FAM151AQ8WW52 585 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 CEP95Q96GE4 821 aa15.31■□□□□ 0.04
NFIX-201ENST00000358552 PPP6R2O75170 966 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 RAD17O75943 681 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 TNNI2P48788 182 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 EIF6P56537 245 aaKnown RBP15.3■□□□□ 0.04
NFIX-201ENST00000358552 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
NFIX-201ENST00000358552 GPATCH4Q5T3I0 446 aaKnown RBP15.3■□□□□ 0.04
NFIX-201ENST00000358552 ANO1Q5XXA6 986 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 DIS3L2Q8IYB7 885 aaKnown RBP15.3■□□□□ 0.04
NFIX-201ENST00000358552 SRBD1Q8N5C6 995 aaKnown RBP15.3■□□□□ 0.04
NFIX-201ENST00000358552 LINC00301Q8NCQ3 95 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 DPF2Q92785 391 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 MKL1Q969V6 931 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 USP28Q96RU2 1077 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.3■□□□□ 0.04
NFIX-201ENST00000358552 FAM198AQ9UFP1 575 aa15.3■□□□□ 0.04
NFIX-201ENST00000358552 CTAGE5O15320 804 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 LMNB1P20700 586 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 SHMT1P34896 483 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 KRT2P35908 639 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 TRAPPC10P48553 1259 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 CXCL9Q07325 125 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 NFIAQ12857 509 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 TNFAIP1Q13829 316 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 SLC39A14Q15043 492 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 PKN1Q16512 942 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 SLC4A8Q2Y0W8 1093 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 UVSSAQ2YD98 709 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 FAM173BQ6P4H8 233 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 TMEM179Q6ZVK1 233 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 PRMT6Q96LA8 375 aaPredicted RBP15.29■□□□□ 0.04
NFIX-201ENST00000358552 PHF20Q9BVI0 1012 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 TMEM63CQ9P1W3 806 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 NYAP2Q9P242 653 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 MAD2L2Q9UI95 211 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 NOL7Q9UMY1 257 aaKnown RBP15.29■□□□□ 0.04
NFIX-201ENST00000358552 CNTNAP5Q8WYK1 1306 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 SPTLC2O15270 562 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 TBC1D12O60347 775 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 TERF1P54274 439 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 EVX2Q03828 476 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 CCDC82Q8N4S0 544 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 BICD2Q8TD16 824 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 CHAMP1Q96JM3 812 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 TDRD3Q9H7E2 651 aaKnown RBP15.29■□□□□ 0.04
NFIX-201ENST00000358552 CABP5Q9NP86 173 aa15.29■□□□□ 0.04
NFIX-201ENST00000358552 KLRF2D3W0D1 207 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 FZD9O00144 591 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 DTNBO60941 627 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 SNHG28P0DPA3 235 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 ME1P48163 572 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 FOSBP53539 338 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 OTUD7BQ6GQQ9 843 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 PDLIM2Q96JY6 352 aa15.28■□□□□ 0.04
NFIX-201ENST00000358552 ZNF70Q9UC06 446 aaPredicted RBP15.28■□□□□ 0.04
NFIX-201ENST00000358552 PPFIA3O75145 1194 aa15.27■□□□□ 0.04
NFIX-201ENST00000358552 TPM2P07951 284 aa15.27■□□□□ 0.04
NFIX-201ENST00000358552 AKR1B1P15121 316 aa15.27■□□□□ 0.04
NFIX-201ENST00000358552 GUCY1A2P33402 732 aa15.27■□□□□ 0.04
NFIX-201ENST00000358552 ZNF280AP59817 542 aaPredicted RBP15.27■□□□□ 0.04
NFIX-201ENST00000358552 RRP36Q96EU6 259 aaKnown RBP15.27■□□□□ 0.04
NFIX-201ENST00000358552 NAP1L5Q96NT1 182 aaPredicted RBP15.27■□□□□ 0.04
NFIX-201ENST00000358552 TSPY26PQ9H489 355 aa15.27■□□□□ 0.04
NFIX-201ENST00000358552 GINM1Q9NU53 330 aa15.27■□□□□ 0.04
NFIX-201ENST00000358552 CCDC39Q9UFE4 941 aa15.27■□□□□ 0.04
NFIX-201ENST00000358552 SEC63Q9UGP8 760 aaKnown RBP15.27■□□□□ 0.04
NFIX-201ENST00000358552 MYH15Q9Y2K3 1946 aa15.27■□□□□ 0.03
NFIX-201ENST00000358552 ADAMTSL1Q8N6G6 1762 aa15.26■□□□□ 0.03
NFIX-201ENST00000358552 CAVIN2O95810 425 aa15.26■□□□□ 0.03
NFIX-201ENST00000358552 GNA11P29992 359 aa15.26■□□□□ 0.03
NFIX-201ENST00000358552 NLRP5P59047 1200 aa15.26■□□□□ 0.03
NFIX-201ENST00000358552 TCP10Q12799 353 aa15.26■□□□□ 0.03
NFIX-201ENST00000358552 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
NFIX-201ENST00000358552 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms