RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 KIF4BQ2VIQ3 1234 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 TRIM65Q6PJ69 517 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 TMCO3Q6UWJ1 677 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 TMTC3Q6ZXV5 915 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 ACRBPQ8NEB7 543 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 HINFPQ9BQA5 517 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
CD46-205ENST00000358170 LMTK3Q96Q04 1460 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 PRPF3O43395 683 aaKnown RBP9.37□□□□□ -0.91
CD46-205ENST00000358170 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 STAT6P42226 847 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 GRIK5Q16478 980 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 ZNF444Q8N0Y2 327 aaPredicted RBP9.37□□□□□ -0.91
CD46-205ENST00000358170 IQUBQ8NA54 791 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 TRERF1Q96PN7 1200 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 PHF20Q9BVI0 1012 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 ZNF446Q9NWS9 450 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 PRDM4Q9UKN5 801 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 TFR2Q9UP52 801 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 KDM4FA0A1W2PPD8 638 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 CCP110O43303 1012 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 ATP2B2Q01814 1243 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
CD46-205ENST00000358170 ZCCHC17Q9NP64 241 aaKnown RBP9.37□□□□□ -0.91
CD46-205ENST00000358170 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
CD46-205ENST00000358170 ABL1P00519 1130 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 TPM1P09493 284 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 UBA7P41226 1012 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 SH3RF3Q8TEJ3 882 aaPredicted RBP9.36□□□□□ -0.91
CD46-205ENST00000358170 SLF1Q9BQI6 1058 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 NUP188Q5SRE5 1749 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 PPP2R3AQ06190 1150 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 SPATA1Q5VX52 437 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 RAD9BQ6WBX8 426 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 TPTE2Q6XPS3 522 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 NELFBQ8WX92 580 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 ZNF804BA4D1E1 1349 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 SPATA31A1Q5TZJ5 1347 aa9.36□□□□□ -0.91
CD46-205ENST00000358170 CCDC175P0C221 793 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 RHOXF2BP0C7M4 288 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 FXR1P51114 621 aaKnown RBP eCLIP9.35□□□□□ -0.91
CD46-205ENST00000358170 UBXN1Q04323 297 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 NFIXQ14938 502 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 AK7Q96M32 723 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 RHOXF2Q9BQY4 288 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 UBA5Q9GZZ9 404 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 RBM28Q9NW13 759 aaKnown RBP9.35□□□□□ -0.91
CD46-205ENST00000358170 ARGLU1Q9NWB6 273 aaPredicted RBP9.35□□□□□ -0.91
CD46-205ENST00000358170 PARP4Q9UKK3 1724 aaKnown RBP9.35□□□□□ -0.91
CD46-205ENST00000358170 LDHBP07195 334 aaKnown RBP9.35□□□□□ -0.91
CD46-205ENST00000358170 ZNF18P17022 549 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 TXLNAP40222 546 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 SARSP49591 514 aaKnown RBP9.35□□□□□ -0.91
CD46-205ENST00000358170 GYS2P54840 703 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 FUT2Q10981 343 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 NR1I3Q14994 352 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 AMIGO3Q86WK7 504 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 NOL10Q9BSC4 688 aaKnown RBP9.35□□□□□ -0.91
CD46-205ENST00000358170 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 ATRNO75882 1429 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 MYH2Q9UKX2 1941 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 STX10O60499 249 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 KRT9P35527 623 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 PICALMQ13492 652 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 IL17AQ16552 155 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 CCDC178Q5BJE1 867 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 TYW1BQ6NUM6 668 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 TMEM139Q8IV31 216 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 ANKRD20A12PQ8NF67 263 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 HPS3Q969F9 1004 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 FERMT2Q96AC1 680 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 L2HGDHQ9H9P8 463 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 GUCA1BQ9UMX6 200 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 XDHP47989 1333 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 FAM205AQ6ZU69 1335 aa9.35□□□□□ -0.91
CD46-205ENST00000358170 TAF1P21675 1872 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 SLIT2O94813 1529 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 ABCC6O95255 1503 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 CNTNAP5Q8WYK1 1306 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 FAM237AA0A1B0GTK4 181 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
CD46-205ENST00000358170 KIF5CO60282 957 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 CALM1P0DP23 149 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 CALM2P0DP24 149 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 CALM3P0DP25 149 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 KIF5BP33176 963 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 RFC4P35249 363 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 KRT31Q15323 416 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 JAKMIP3Q5VZ66 844 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 USP17L2Q6R6M4 530 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 BLIDQ8IZY5 108 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
CD46-205ENST00000358170 SMARCC1Q92922 1105 aaPredicted RBP9.34□□□□□ -0.91
CD46-205ENST00000358170 BRIP1Q9BX63 1249 aa9.34□□□□□ -0.91
CD46-205ENST00000358170 TMEM60Q9H2L4 133 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms