RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 PDRG1Q9NUG6 133 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 KCNH4Q9UQ05 1017 aa17.46■□□□□ 0.39
CCNE1-202ENST00000357943 TOP1P11387 765 aaKnown RBP17.45■□□□□ 0.38
CCNE1-202ENST00000357943 HSPA6P17066 643 aa17.45■□□□□ 0.38
CCNE1-202ENST00000357943 LIFRP42702 1097 aa17.45■□□□□ 0.38
CCNE1-202ENST00000357943 KIAA1683Q9H0B3 1180 aa17.45■□□□□ 0.38
CCNE1-202ENST00000357943 CXCL11O14625 94 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 HMGCS2P54868 508 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 FGD1P98174 961 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 TOB2Q14106 344 aaPredicted RBP17.44■□□□□ 0.38
CCNE1-202ENST00000357943 KIAA1755Q5JYT7 1200 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 RASGRP2Q7LDG7 609 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 BRF1Q92994 677 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 AGXT2Q9BYV1 514 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 SH2D4AQ9H788 454 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 KAT14Q9H8E8 782 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 EMILIN3Q9NT22 766 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 MTMR7Q9Y216 660 aa17.44■□□□□ 0.38
CCNE1-202ENST00000357943 A0A0G2JLL6 359 aaPredicted RBP17.43■□□□□ 0.38
CCNE1-202ENST00000357943 F5H6K3 240 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 RAD21O60216 631 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 KLRC3Q07444 240 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 RABEP1Q15276 862 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 PRRT2Q7Z6L0 340 aaPredicted RBP17.43■□□□□ 0.38
CCNE1-202ENST00000357943 SPICE1Q8N0Z3 855 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 FBXL16Q8N461 479 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 PNMA1Q8ND90 353 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 MS4A4AQ96JQ5 239 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 LARP6Q9BRS8 491 aaKnown RBP17.43■□□□□ 0.38
CCNE1-202ENST00000357943 VCPKMTQ9H867 229 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 C19orf81C9J6K1 198 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 USP14P54578 494 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 SNAPC2Q13487 334 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 SH3D19Q5HYK7 790 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 SGMS1Q86VZ5 419 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 CAPNS2Q96L46 248 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 ZIC5Q96T25 663 aa17.43■□□□□ 0.38
CCNE1-202ENST00000357943 NDUFB10O96000 172 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 GTF2A2P52657 109 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 AK2P54819 239 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 APOBRQ0VD83 1088 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 MOGSQ13724 837 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 NFXL1Q6ZNB6 911 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 TMTC2Q8N394 836 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 GMCL1P1Q8NEA9 526 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 GOPCQ9HD26 462 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 BRPF3Q9ULD4 1205 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 SYNPO2Q9UMS6 1093 aa17.42■□□□□ 0.38
CCNE1-202ENST00000357943 CCDC69A6NI79 296 aa17.41■□□□□ 0.38
CCNE1-202ENST00000357943 SLFN13Q68D06 897 aa17.41■□□□□ 0.38
CCNE1-202ENST00000357943 USP17L2Q6R6M4 530 aa17.41■□□□□ 0.38
CCNE1-202ENST00000357943 MYL10Q9BUA6 226 aa17.41■□□□□ 0.38
CCNE1-202ENST00000357943 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
CCNE1-202ENST00000357943 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
CCNE1-202ENST00000357943 MYH4Q9Y623 1939 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 AOC2O75106 756 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 PDHBP11177 359 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 VCAM1P19320 739 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 TROAPQ12815 778 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 GADL1Q6ZQY3 521 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 RAB11FIP4Q86YS3 637 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 ZNF654Q8IZM8 581 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 BRI3BPQ8WY22 251 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 C12orf42Q96LP6 360 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
CCNE1-202ENST00000357943 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 SLC12A7Q9Y666 1083 aa17.4■□□□□ 0.38
CCNE1-202ENST00000357943 CCL15-CCL14A0A0B4J2E2 113 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 KLF18A0A0U1RQI7 1052 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 CETPP11597 493 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 RXRAP19793 462 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 VEGFBP49765 207 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 CCL15Q16663 113 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 TREML2Q5T2D2 321 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 APOA5Q6Q788 366 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 NOL8Q76FK4 1167 aaKnown RBP17.39■□□□□ 0.38
CCNE1-202ENST00000357943 CATIPQ7Z7H3 387 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 LPAR1Q92633 364 aa17.39■□□□□ 0.38
CCNE1-202ENST00000357943 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
CCNE1-202ENST00000357943 CD2BP2O95400 341 aaKnown RBP17.39■□□□□ 0.37
CCNE1-202ENST00000357943 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
CCNE1-202ENST00000357943 SLC1A4P43007 532 aa17.39■□□□□ 0.37
CCNE1-202ENST00000357943 KIF23Q02241 960 aaPredicted RBP17.39■□□□□ 0.37
CCNE1-202ENST00000357943 NOGQ13253 232 aa17.39■□□□□ 0.37
CCNE1-202ENST00000357943 FASTKD5Q7L8L6 764 aaKnown RBP17.39■□□□□ 0.37
CCNE1-202ENST00000357943 MICU3Q86XE3 530 aa17.39■□□□□ 0.37
CCNE1-202ENST00000357943 PROCA1Q8NCQ7 364 aaPredicted RBP17.39■□□□□ 0.37
CCNE1-202ENST00000357943 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
CCNE1-202ENST00000357943 GMCL1Q96IK5 515 aa17.39■□□□□ 0.37
CCNE1-202ENST00000357943 PTPN18Q99952 460 aa17.39■□□□□ 0.37
CCNE1-202ENST00000357943 PTPRFP10586 1907 aa17.38■□□□□ 0.37
CCNE1-202ENST00000357943 TESPA1A2RU30 521 aaPredicted RBP17.38■□□□□ 0.37
CCNE1-202ENST00000357943 MANSC4A6NHS7 340 aaPredicted RBP17.38■□□□□ 0.37
CCNE1-202ENST00000357943 EVCP57679 992 aa17.38■□□□□ 0.37
CCNE1-202ENST00000357943 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
CCNE1-202ENST00000357943 FAM83BQ5T0W9 1011 aa17.38■□□□□ 0.37
CCNE1-202ENST00000357943 GPAT2Q6NUI2 795 aa17.38■□□□□ 0.37
CCNE1-202ENST00000357943 KCTD1Q719H9 257 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms