RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 COL9A1P20849 921 aa19.35■□□□□ 0.69
IFT20-202ENST00000357896 CYP7A1P22680 504 aa19.35■□□□□ 0.69
IFT20-202ENST00000357896 TRMT2AQ8IZ69 625 aaKnown RBP19.35■□□□□ 0.69
IFT20-202ENST00000357896 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
IFT20-202ENST00000357896 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
IFT20-202ENST00000357896 MROH8Q9H579 483 aa19.35■□□□□ 0.69
IFT20-202ENST00000357896 RAG1P15918 1043 aa19.34■□□□□ 0.69
IFT20-202ENST00000357896 ERCC3P19447 782 aa19.34■□□□□ 0.69
IFT20-202ENST00000357896 TNNI3KQ59H18 835 aa19.34■□□□□ 0.69
IFT20-202ENST00000357896 MB21D1Q8N884 522 aa19.34■□□□□ 0.69
IFT20-202ENST00000357896 NRBP1Q9UHY1 535 aa19.34■□□□□ 0.69
IFT20-202ENST00000357896 PHF24Q9UPV7 400 aa19.34■□□□□ 0.69
IFT20-202ENST00000357896 FPGT-TNNI3KV9GXZ4 949 aa19.34■□□□□ 0.69
IFT20-202ENST00000357896 CDK5RAP2Q96SN8 1893 aa19.33■□□□□ 0.69
IFT20-202ENST00000357896 PNMA6EA0A0J9YXQ4 647 aa19.33■□□□□ 0.68
IFT20-202ENST00000357896 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.33■□□□□ 0.68
IFT20-202ENST00000357896 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.33■□□□□ 0.68
IFT20-202ENST00000357896 KIAA0355O15063 1070 aa19.33■□□□□ 0.68
IFT20-202ENST00000357896 COBLO75128 1261 aa19.33■□□□□ 0.68
IFT20-202ENST00000357896 ZAP70P43403 619 aa19.33■□□□□ 0.68
IFT20-202ENST00000357896 GRIN2CQ14957 1233 aa19.33■□□□□ 0.68
IFT20-202ENST00000357896 TMED8Q6PL24 325 aaPredicted RBP19.33■□□□□ 0.68
IFT20-202ENST00000357896 RNF180Q86T96 592 aa19.33■□□□□ 0.68
IFT20-202ENST00000357896 DBNDD2Q9BQY9 259 aa19.33■□□□□ 0.68
IFT20-202ENST00000357896 PIH1D3Q9NQM4 214 aaKnown RBP19.33■□□□□ 0.68
IFT20-202ENST00000357896 RARBP10826 455 aa19.32■□□□□ 0.68
IFT20-202ENST00000357896 FPGSQ05932 587 aa19.32■□□□□ 0.68
IFT20-202ENST00000357896 PRAMEF19Q5SWL8 479 aa19.32■□□□□ 0.68
IFT20-202ENST00000357896 MIGA1Q8NAN2 632 aa19.32■□□□□ 0.68
IFT20-202ENST00000357896 TANGO6Q9C0B7 1094 aa19.32■□□□□ 0.68
IFT20-202ENST00000357896 XPNPEP3Q9NQH7 507 aa19.32■□□□□ 0.68
IFT20-202ENST00000357896 ZNF236Q9UL36 1845 aa19.32■□□□□ 0.68
IFT20-202ENST00000357896 IDH1O75874 414 aaKnown RBP19.31■□□□□ 0.68
IFT20-202ENST00000357896 DNAJB2P25686 324 aa19.31■□□□□ 0.68
IFT20-202ENST00000357896 ITGB8P26012 769 aa19.31■□□□□ 0.68
IFT20-202ENST00000357896 SHMT1P34896 483 aa19.31■□□□□ 0.68
IFT20-202ENST00000357896 EPHB4P54760 987 aa19.31■□□□□ 0.68
IFT20-202ENST00000357896 OS9Q13438 667 aaPredicted RBP19.31■□□□□ 0.68
IFT20-202ENST00000357896 FAM47AQ5JRC9 791 aa19.31■□□□□ 0.68
IFT20-202ENST00000357896 MAML3Q96JK9 1138 aa19.31■□□□□ 0.68
IFT20-202ENST00000357896 TMEM39AQ9NV64 488 aa19.31■□□□□ 0.68
IFT20-202ENST00000357896 FCER1AP12319 257 aa19.3■□□□□ 0.68
IFT20-202ENST00000357896 PLS1Q14651 629 aa19.3■□□□□ 0.68
IFT20-202ENST00000357896 SEPT2Q15019 361 aa19.3■□□□□ 0.68
IFT20-202ENST00000357896 NCAPG2Q86XI2 1143 aa19.3■□□□□ 0.68
IFT20-202ENST00000357896 MAGEB6Q8N7X4 407 aa19.3■□□□□ 0.68
IFT20-202ENST00000357896 ATXN2LQ8WWM7 1075 aaKnown RBP19.3■□□□□ 0.68
IFT20-202ENST00000357896 ZNF576Q9H609 170 aa19.3■□□□□ 0.68
IFT20-202ENST00000357896 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
IFT20-202ENST00000357896 PQBP1O60828 265 aaKnown RBP19.29■□□□□ 0.68
IFT20-202ENST00000357896 POLR3DP05423 398 aaPredicted RBP19.29■□□□□ 0.68
IFT20-202ENST00000357896 GUCY1A2P33402 732 aa19.29■□□□□ 0.68
IFT20-202ENST00000357896 RARSP54136 660 aaKnown RBP19.29■□□□□ 0.68
IFT20-202ENST00000357896 USP38Q8NB14 1042 aa19.29■□□□□ 0.68
IFT20-202ENST00000357896 TOX2Q96NM4 488 aa19.29■□□□□ 0.68
IFT20-202ENST00000357896 MYH1P12882 1939 aa19.28■□□□□ 0.68
IFT20-202ENST00000357896 DCDC2CA8MYV0 355 aa19.28■□□□□ 0.68
IFT20-202ENST00000357896 MPHOSPH10O00566 681 aaKnown RBP19.28■□□□□ 0.68
IFT20-202ENST00000357896 DSG3P32926 999 aa19.28■□□□□ 0.68
IFT20-202ENST00000357896 PLCD1P51178 756 aa19.28■□□□□ 0.68
IFT20-202ENST00000357896 MAP3K12Q12852 859 aa19.28■□□□□ 0.68
IFT20-202ENST00000357896 TIFAQ96CG3 184 aa19.28■□□□□ 0.68
IFT20-202ENST00000357896 A0A1W2PQ45 241 aaPredicted RBP19.27■□□□□ 0.68
IFT20-202ENST00000357896 A0A1W2PQY0 241 aa19.27■□□□□ 0.68
IFT20-202ENST00000357896 A0A1W2PRG0 241 aa19.27■□□□□ 0.68
IFT20-202ENST00000357896 FLOT1O75955 427 aa19.27■□□□□ 0.68
IFT20-202ENST00000357896 SLC25A27O95847 323 aa19.27■□□□□ 0.68
IFT20-202ENST00000357896 CCDC174Q6PII3 467 aa19.27■□□□□ 0.68
IFT20-202ENST00000357896 ANKRD33Q7Z3H0 272 aa19.27■□□□□ 0.68
IFT20-202ENST00000357896 GAS2L1Q99501 681 aaPredicted RBP19.27■□□□□ 0.68
IFT20-202ENST00000357896 SURF6O75683 361 aaKnown RBP19.26■□□□□ 0.67
IFT20-202ENST00000357896 PGK1P00558 417 aa19.26■□□□□ 0.67
IFT20-202ENST00000357896 GABPAQ06546 454 aa19.26■□□□□ 0.67
IFT20-202ENST00000357896 POLA2Q14181 598 aa19.26■□□□□ 0.67
IFT20-202ENST00000357896 SLC44A5Q8NCS7 719 aa19.26■□□□□ 0.67
IFT20-202ENST00000357896 NUP133Q8WUM0 1156 aa19.26■□□□□ 0.67
IFT20-202ENST00000357896 TINF2Q9BSI4 451 aa19.26■□□□□ 0.67
IFT20-202ENST00000357896 TSEN34Q9BSV6 310 aaKnown RBP19.26■□□□□ 0.67
IFT20-202ENST00000357896 DIS3Q9Y2L1 958 aaKnown RBP19.26■□□□□ 0.67
IFT20-202ENST00000357896 FAAP100Q0VG06 881 aa19.25■□□□□ 0.67
IFT20-202ENST00000357896 AKNAD1Q5T1N1 836 aa19.25■□□□□ 0.67
IFT20-202ENST00000357896 TMEM179Q6ZVK1 233 aa19.25■□□□□ 0.67
IFT20-202ENST00000357896 SH2D4AQ9H788 454 aa19.25■□□□□ 0.67
IFT20-202ENST00000357896 DBNLQ9UJU6 430 aaKnown RBP19.25■□□□□ 0.67
IFT20-202ENST00000357896 ROBO3Q96MS0 1386 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 TIMP1P01033 207 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 TRIM27P14373 513 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 AKR1A1P14550 325 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 KCTD2Q14681 263 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 SSH3Q8TE77 659 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 ATG4CQ96DT6 458 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 ASB2Q96Q27 587 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 MMP19Q99542 508 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 ARHGEF10LQ9HCE6 1279 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 STARD7Q9NQZ5 370 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 THEGQ9P2T0 379 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 CNPY2Q9Y2B0 182 aa19.24■□□□□ 0.67
IFT20-202ENST00000357896 MFSD5Q6N075 450 aa19.23■□□□□ 0.67
IFT20-202ENST00000357896 PPM1EQ8WY54 764 aa19.23■□□□□ 0.67
IFT20-202ENST00000357896 RIOK1Q9BRS2 568 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms