RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 MTMR2Q13614 643 aa10.59□□□□□ -0.71
UPF2-202ENST00000357604 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
UPF2-202ENST00000357604 WNK4Q96J92 1243 aa10.59□□□□□ -0.71
UPF2-202ENST00000357604 MKRN1Q9UHC7 482 aaKnown RBP10.59□□□□□ -0.71
UPF2-202ENST00000357604 ABCB11O95342 1321 aa10.59□□□□□ -0.71
UPF2-202ENST00000357604 VPS37CA5D8V6 355 aaPredicted RBP10.58□□□□□ -0.72
UPF2-202ENST00000357604 TM6SF1Q9BZW5 370 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 CNPY2Q9Y2B0 182 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 MYH3P11055 1940 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 DKC1O60832 514 aaKnown RBP eCLIP10.58□□□□□ -0.72
UPF2-202ENST00000357604 BMP15O95972 392 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 MYCNP04198 464 aaPredicted RBP10.58□□□□□ -0.72
UPF2-202ENST00000357604 GSPT1P15170 499 aaKnown RBP10.58□□□□□ -0.72
UPF2-202ENST00000357604 PDE4DQ08499 809 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 NBPF12Q5TAG4 269 aaPredicted RBP10.58□□□□□ -0.72
UPF2-202ENST00000357604 GALNT17Q6IS24 598 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 BRF1Q92994 677 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 C8orf76Q96K31 380 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 ZKSCAN3Q9BRR0 538 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 RPAP3Q9H6T3 665 aaPredicted RBP10.58□□□□□ -0.72
UPF2-202ENST00000357604 TLL2Q9Y6L7 1015 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 TNKSO95271 1327 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 DEXIO95424 95 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 SPP2Q13103 211 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 NEDD1Q8NHV4 660 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 ERMNQ8TAM6 284 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 TCP11L1Q9NUJ3 509 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 ANAPC4Q9UJX5 808 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 K7ELQ4 463 aaPredicted RBP10.58□□□□□ -0.72
UPF2-202ENST00000357604 CLSTN1O94985 981 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 RCAN1P53805 252 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 CERS5Q8N5B7 392 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 GPRC5AQ8NFJ5 357 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 MAP4K1Q92918 833 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 SYAP1Q96A49 352 aaPredicted RBP10.58□□□□□ -0.72
UPF2-202ENST00000357604 MMP19Q99542 508 aa10.58□□□□□ -0.72
UPF2-202ENST00000357604 GSG1L2A8MUP6 293 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 MAPK4P31152 587 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 ARHGEF16Q5VV41 709 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 SEC62Q99442 399 aaKnown RBP10.57□□□□□ -0.72
UPF2-202ENST00000357604 MYH14Q7Z406 1995 aaKnown RBP10.57□□□□□ -0.72
UPF2-202ENST00000357604 ANKRD23Q86SG2 305 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
UPF2-202ENST00000357604 TNPO2O14787 897 aaKnown RBP10.57□□□□□ -0.72
UPF2-202ENST00000357604 FKTNO75072 461 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 KRT2P35908 639 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 FOSBP53539 338 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 COG2Q14746 738 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 SEPT2Q15019 361 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 AMNQ9BXJ7 453 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 ALAS1P13196 640 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 EEF2P13639 858 aaKnown RBP10.57□□□□□ -0.72
UPF2-202ENST00000357604 CCND2P30279 289 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 HSPA4P34932 840 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 CCDC144CPQ8IYA2 1237 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 CPXCR1Q8N123 301 aa10.57□□□□□ -0.72
UPF2-202ENST00000357604 HMGCS2P54868 508 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 ANP32BQ92688 251 aaKnown RBP10.56□□□□□ -0.72
UPF2-202ENST00000357604 CAPNS2Q96L46 248 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 SDF4Q9BRK5 362 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 USP26Q9BXU7 913 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 AP5M1Q9H0R1 490 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 FCER1AP12319 257 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 NOL9Q5SY16 702 aaKnown RBP10.56□□□□□ -0.72
UPF2-202ENST00000357604 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 TNRC6CQ9HCJ0 1690 aaKnown RBP10.56□□□□□ -0.72
UPF2-202ENST00000357604 ZNF654Q8IZM8 581 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 LSG1Q9H089 658 aaKnown RBP10.56□□□□□ -0.72
UPF2-202ENST00000357604 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
UPF2-202ENST00000357604 GNRH1P01148 92 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 LLPHQ9BRT6 129 aaKnown RBP10.56□□□□□ -0.72
UPF2-202ENST00000357604 SPEF2Q9C093 1822 aa10.56□□□□□ -0.72
UPF2-202ENST00000357604 ASB14A6NK59 587 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 CYP2D6P10635 497 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 MAP2K2P36507 400 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 RGS2P41220 211 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 BACE1P56817 501 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 FAM83BQ5T0W9 1011 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 FRMPD2Q68DX3 1309 aaPredicted RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 PRPF38AQ8NAV1 312 aaKnown RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 PYM1Q9BRP8 204 aaKnown RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 LARP1BQ659C4 914 aaKnown RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 NSMFQ6X4W1 530 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 GMCL1P1Q8NEA9 526 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 VCPKMTQ9H867 229 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 ORC3Q9UBD5 711 aaPredicted RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 POTEB2H3BUK9 544 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 CDK11BP21127 795 aaKnown RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 PRMT2P55345 433 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 CHST13Q8NET6 341 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 TRIM47Q96LD4 638 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 CCDC39Q9UFE4 941 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 SLC45A1Q9Y2W3 748 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 COL2A1P02458 1487 aaPredicted RBP10.55□□□□□ -0.72
UPF2-202ENST00000357604 PFASO15067 1338 aa10.55□□□□□ -0.72
UPF2-202ENST00000357604 CCT2P78371 535 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms