RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TLL2Q9Y6L7 1015 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 MYH8P13535 1937 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 TRPM7Q96QT4 1865 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 CYTH3O43739 400 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 RAD21O60216 631 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 ASNSP08243 561 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 PDIA3P30101 505 aaKnown RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 SLC16A2P36021 539 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 IREB2P48200 963 aaKnown RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 ZNF157P51786 506 aaPredicted RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 CCT2P78371 535 aaKnown RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 CAP1Q01518 475 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 FSTL1Q12841 308 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 NOL9Q5SY16 702 aaKnown RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 DCAF15Q66K64 600 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 AMOTL1Q8IY63 956 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 MKL1Q969V6 931 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 SHISA4Q96DD7 197 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 TRIM34Q9BYJ4 488 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 KRT23Q9C075 422 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 UBA5Q9GZZ9 404 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 RNF41Q9H4P4 317 aaPredicted RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 TCP11L1Q9NUJ3 509 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 ABT1Q9ULW3 272 aaKnown RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 TMX2Q9Y320 296 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 RBM19Q9Y4C8 960 aaKnown RBP4.74□□□□□ -1.65
LIG4-201ENST00000356922 CYP46A1Q9Y6A2 500 aa4.74□□□□□ -1.65
LIG4-201ENST00000356922 PLIN4Q96Q06 1357 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 SPDYE5A6NIY4 337 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 CTDNEP1O95476 244 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 NDUFB10O96000 172 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 BACE1P56817 501 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 C1QTNF8P60827 252 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 TRDNQ13061 729 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 GPAT2Q6NUI2 795 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 RALYLQ86SE5 291 aaKnown RBP4.73□□□□□ -1.65
LIG4-201ENST00000356922 FAM43AQ8N2R8 423 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 ZNF280CQ8ND82 737 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 BRI3BPQ8WY22 251 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 ANKS1AQ92625 1134 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 CCDC17Q96LX7 622 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 CNNM2Q9H8M5 875 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 KANSL2Q9H9L4 492 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 GJB4Q9NTQ9 266 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 FRMPD2Q68DX3 1309 aaPredicted RBP4.73□□□□□ -1.65
LIG4-201ENST00000356922 IGF2BP3O00425 579 aaKnown RBP eCLIP4.73□□□□□ -1.65
LIG4-201ENST00000356922 PLEKHA8P1O95397 391 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 TTLL1O95922 423 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 SLC3A2P08195 630 aaKnown RBP4.73□□□□□ -1.65
LIG4-201ENST00000356922 PDHBP11177 359 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 VEGFBP49765 207 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 SPRYD7Q5W111 196 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 APOA5Q6Q788 366 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 ARMC9Q7Z3E5 817 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 DGKHQ86XP1 1220 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 RASAL3Q86YV0 1011 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 DNAJC5GQ8N7S2 189 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 PNMA1Q8ND90 353 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 NYAP2Q9P242 653 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 MAD2L2Q9UI95 211 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 KLF18A0A0U1RQI7 1052 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 NF2P35240 595 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 EVCP57679 992 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 SCRN1Q12765 414 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 WTAPQ15007 396 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 FAM83BQ5T0W9 1011 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 IFIT1BQ5T764 474 aaKnown RBP4.73□□□□□ -1.65
LIG4-201ENST00000356922 RGMBQ6NW40 437 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 SGMS1Q86VZ5 419 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 MICU3Q86XE3 530 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 ERO1BQ86YB8 467 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 UBAC1Q9BSL1 405 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 WDR18Q9BV38 432 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 TBC1D2Q9BYX2 928 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 CABP5Q9NP86 173 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 CSADQ9Y600 493 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 PTPRFP10586 1907 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 MYH4Q9Y623 1939 aa4.73□□□□□ -1.65
LIG4-201ENST00000356922 USP17L10C9JJH3 530 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 ECM2O94769 699 aaPredicted RBP4.72□□□□□ -1.65
LIG4-201ENST00000356922 SNHG28P0DPA3 235 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 CYP2C8P10632 490 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 VCAM1P19320 739 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 LIFRP42702 1097 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 PPATQ06203 517 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 FUT2Q10981 343 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 KRT32Q14532 448 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 NTRK3Q16288 839 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 SAMD1Q6SPF0 538 aaPredicted RBP4.72□□□□□ -1.65
LIG4-201ENST00000356922 IQCA1Q86XH1 822 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 ZNF654Q8IZM8 581 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 FBXL16Q8N461 479 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 SRBD1Q8N5C6 995 aaKnown RBP4.72□□□□□ -1.65
LIG4-201ENST00000356922 SPRYD3Q8NCJ5 442 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 NUP133Q8WUM0 1156 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 PIBF1Q8WXW3 757 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 PICK1Q9NRD5 415 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 KCNH4Q9UQ05 1017 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 DOCK1Q14185 1865 aa4.72□□□□□ -1.65
LIG4-201ENST00000356922 PCP11498 1178 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms