RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SNCAIPQ9Y6H5 919 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 ZMYM6O95789 1325 aa4.76□□□□□ -1.65
CNOT4-202ENST00000356162 SPDYE5A6NIY4 337 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 RNF223E7ERA6 249 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 GSPT1P15170 499 aaKnown RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 MAP2K2P36507 400 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 MFAP1P55081 439 aaKnown RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 PPIL2Q13356 520 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SLFNL1Q499Z3 407 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 TTC6Q86TZ1 520 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SCYL3Q8IZE3 742 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 RILPL2Q969X0 211 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 STRBPQ96SI9 672 aaKnown RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 TRIM34Q9BYJ4 488 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SAP30BPQ9UHR5 308 aaKnown RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SLC4A4Q9Y6R1 1079 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 CCDC171Q6TFL3 1326 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 MANSC4A6NHS7 340 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 PHF20L1A8MW92 1017 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 CHGBP05060 677 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 POLR3DP05423 398 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 CD46P15529 392 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 MDM2Q00987 491 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 NMIQ13287 307 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SBK1Q52WX2 424 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SPRYD7Q5W111 196 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 ERO1BQ86YB8 467 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 FOXP4Q8IVH2 680 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 CRACR2BQ8N4Y2 399 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SDR42E1Q8WUS8 393 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SLC10A4Q96EP9 437 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 CLMNQ96JQ2 1002 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 DNAJC18Q9H819 358 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 ELP3Q9H9T3 547 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 EPB41L4AQ9HCS5 686 aaPredicted RBP4.75□□□□□ -1.65
CNOT4-202ENST00000356162 DIAPH3Q9NSV4 1193 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 SWAP70Q9UH65 585 aa4.75□□□□□ -1.65
CNOT4-202ENST00000356162 A0A0D9SFI3 127 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 PRKAB2O43741 272 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 CTNND1O60716 968 aaKnown RBP4.74□□□□□ -1.65
CNOT4-202ENST00000356162 AOC2O75106 756 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 S1PR4O95977 384 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 SDSP20132 328 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 INPP5BP32019 993 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 GJA5P36382 358 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 MAP2K1Q02750 393 aaPredicted RBP4.74□□□□□ -1.65
CNOT4-202ENST00000356162 PPATQ06203 517 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 GABPAQ06546 454 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 SREBF2Q12772 1141 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 MCMDC2Q4G0Z9 681 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 MIGA2Q7L4E1 593 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 OPTNQ96CV9 577 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 NACAP1Q9BZK3 213 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 PICK1Q9NRD5 415 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 MCM9Q9NXL9 1143 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 SERPINB13Q9UIV8 391 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 PALD1Q9ULE6 856 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 FZD1Q9UP38 647 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 GSG1L2A8MUP6 293 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 CA12O43570 354 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 ZMYND10O75800 440 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 TDO2P48775 406 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 ALX1Q15699 326 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 BMP2KLQ5H9B9 411 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 C12orf60Q5U649 245 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 TATDN1Q6P1N9 297 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 C16orf86Q6ZW13 317 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 RUFY2Q8WXA3 655 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 FAM227BQ96M60 508 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 SEC62Q99442 399 aaKnown RBP4.74□□□□□ -1.65
CNOT4-202ENST00000356162 SAGE1Q9NXZ1 904 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 KCNH4Q9UQ05 1017 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 PLIN4Q96Q06 1357 aa4.74□□□□□ -1.65
CNOT4-202ENST00000356162 FAM196BA6NMK8 535 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 PATL2C9JE40 543 aaKnown RBP4.73□□□□□ -1.65
CNOT4-202ENST00000356162 ASNSP08243 561 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 CYP2D6P10635 497 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 PTPRAP18433 802 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 SHMT1P34896 483 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 CAP2P40123 477 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 GTF2A2P52657 109 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 KIF23Q02241 960 aaPredicted RBP4.73□□□□□ -1.65
CNOT4-202ENST00000356162 GRM1Q13255 1194 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 CTR9Q6PD62 1173 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 CCDC129Q6ZRS4 1044 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 ANKLE1Q8NAG6 615 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 ZKSCAN4Q969J2 545 aaPredicted RBP4.73□□□□□ -1.65
CNOT4-202ENST00000356162 THAP11Q96EK4 314 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 SPSB2Q99619 263 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 NAPBQ9H115 298 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 AS3MTQ9HBK9 375 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 ZCCHC17Q9NP64 241 aaKnown RBP4.73□□□□□ -1.65
CNOT4-202ENST00000356162 ZBTB21Q9ULJ3 1066 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 USP17L12C9JPN9 530 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 USP17L21D6R901 530 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 CXCL11O14625 94 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 FOXP2O15409 715 aa4.73□□□□□ -1.65
CNOT4-202ENST00000356162 HSPA1AP0DMV8 641 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms