RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 RIMBP3CA6NJZ7 1639 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 RIMBP3BA6NNM3 1639 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 RIMBP3Q9UFD9 1639 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 AP1G2O75843 785 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 GYPCP04921 128 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 IMPDH2P12268 514 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCR9-201ENST00000355983 RRS1Q15050 365 aaKnown RBP8.61□□□□□ -1.03
CCR9-201ENST00000355983 LRIG3Q6UXM1 1119 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 ANKRD23Q86SG2 305 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 AACSQ86V21 672 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 ACRBPQ8NEB7 543 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 SPDYE1Q8NFV5 336 aaPredicted RBP8.61□□□□□ -1.03
CCR9-201ENST00000355983 DTNBP1Q96EV8 351 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 TBC1D2BQ9UPU7 963 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 SLIT1O75093 1534 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 COL15A1P39059 1388 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 WDR19Q8NEZ3 1342 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 A0A0U1RQJ8 604 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 DNM1LO00429 736 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 PPIP5K2O43314 1243 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 CDC27P30260 824 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 KRT83P78385 493 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 MTHFD1LQ6UB35 978 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 NSMCE1Q8WV22 266 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 ATRIPQ8WXE1 791 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 L3MBTL3Q96JM7 780 aaPredicted RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 ATP6V1G3Q96LB4 118 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 NOP53Q9NZM5 478 aaKnown RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 MYO5AQ9Y4I1 1855 aaKnown RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 GMNCA6NCL1 334 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 BUB1BO60566 1050 aaPredicted RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 NDUFA10O95299 355 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 TFRCP02786 760 aaKnown RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 CASP14P31944 242 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 SPAG1Q07617 926 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 ITGB3BPQ13352 177 aaPredicted RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 POSTNQ15063 836 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 CCDC155Q8N6L0 562 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 ZNF579Q8NAF0 562 aaKnown RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 CCT6BQ92526 530 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 JAKMIP2Q96AA8 810 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 NUP58Q9BVL2 599 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 HAUS2Q9NVX0 235 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 RGL1Q9NZL6 768 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 LIMA1Q9UHB6 759 aaKnown RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 KCNH3Q9ULD8 1083 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 PCDHGC5Q9Y5F6 944 aa8.6□□□□□ -1.03
CCR9-201ENST00000355983 EPN1Q9Y6I3 576 aaPredicted RBP8.6□□□□□ -1.03
CCR9-201ENST00000355983 SPEF2Q9C093 1822 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 SH2B2O14492 632 aaPredicted RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 TRAPPC3O43617 180 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 CAND2O75155 1236 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 ATP1A1P05023 1023 aaKnown RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 FBLN1P23142 703 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 MCMDC2Q4G0Z9 681 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 ZIM3Q96PE6 472 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 MAP3K14Q99558 947 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 RIPOR2Q9Y4F9 1068 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 UTYO14607 1347 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 IFIT3O14879 490 aaKnown RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 TEX33O43247 280 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 KRT86O43790 486 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 PIP4K2AP48426 406 aaPredicted RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 PAPOLAP51003 745 aaKnown RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 MST1RQ04912 1400 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 ZNF268Q14587 947 aaPredicted RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 LONRF3Q496Y0 759 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 STOX1Q6ZVD7 989 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 NME9Q86XW9 330 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 GALNT15Q8N3T1 639 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 MKL1Q969V6 931 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 ZBTB10Q96DT7 871 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 MED15Q96RN5 788 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 MMTAG2Q9BU76 263 aaKnown RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 SLC5A4Q9NY91 659 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 STIM2Q9P246 746 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 REXO2Q9Y3B8 237 aaKnown RBP8.59□□□□□ -1.03
CCR9-201ENST00000355983 USP31Q70CQ4 1352 aa8.59□□□□□ -1.03
CCR9-201ENST00000355983 ZNF609O15014 1411 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 FXR1P51114 621 aaKnown RBP eCLIP8.58□□□□□ -1.04
CCR9-201ENST00000355983 BIRC3Q13489 604 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 CUL4BQ13620 913 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 SEPT2Q15019 361 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 E2F5Q15329 346 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 CCDC57Q2TAC2 916 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 CFAP58Q5T655 872 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 MSL1Q68DK7 614 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 CACNA2D3Q8IZS8 1091 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 BICD1Q96G01 975 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 DNAJC7Q99615 494 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 TSGA10Q9BZW7 698 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 SAMSN1Q9NSI8 373 aaKnown RBP8.58□□□□□ -1.04
CCR9-201ENST00000355983 ANKIB1Q9P2G1 1089 aa8.58□□□□□ -1.04
CCR9-201ENST00000355983 RNF14Q9UBS8 474 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms