RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 MFSD6Q6ZSS7 791 aa17.19■□□□□ 0.34
VAT1-201ENST00000355653 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
VAT1-201ENST00000355653 IFNL3Q8IZI9 196 aa17.19■□□□□ 0.34
VAT1-201ENST00000355653 CRACR2BQ8N4Y2 399 aaPredicted RBP17.19■□□□□ 0.34
VAT1-201ENST00000355653 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
VAT1-201ENST00000355653 GSDMAQ96QA5 445 aa17.19■□□□□ 0.34
VAT1-201ENST00000355653 STRBPQ96SI9 672 aaKnown RBP17.19■□□□□ 0.34
VAT1-201ENST00000355653 AATFQ9NY61 560 aaKnown RBP eCLIP17.19■□□□□ 0.34
VAT1-201ENST00000355653 REXO2Q9Y3B8 237 aaKnown RBP17.19■□□□□ 0.34
VAT1-201ENST00000355653 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
VAT1-201ENST00000355653 TMEM94Q12767 1356 aa17.19■□□□□ 0.34
VAT1-201ENST00000355653 ERICH2A1L162 156 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 MBD4O95243 580 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
VAT1-201ENST00000355653 COPB1P53618 953 aaKnown RBP17.18■□□□□ 0.34
VAT1-201ENST00000355653 TTF1Q15361 905 aaPredicted RBP17.18■□□□□ 0.34
VAT1-201ENST00000355653 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.18■□□□□ 0.34
VAT1-201ENST00000355653 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 ARMT1Q9H993 441 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 VIPAS39Q9H9C1 493 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 SEMA3EO15041 775 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 PRDM1O75626 825 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 SART3Q15020 963 aaKnown RBP17.18■□□□□ 0.34
VAT1-201ENST00000355653 UBE3CQ15386 1083 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 SAR1BQ9Y6B6 198 aa17.18■□□□□ 0.34
VAT1-201ENST00000355653 KCNJ18B7U540 433 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 WNT7AO00755 349 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 FECHP22830 423 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 PHKA1P46020 1223 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 KCNJ12Q14500 433 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 ZNF174Q15697 407 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 EFCAB13Q8IY85 973 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 COG1Q8WTW3 980 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 MST1RQ04912 1400 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 CCT5P48643 541 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 AKNAD1Q5T1N1 836 aa17.17■□□□□ 0.34
VAT1-201ENST00000355653 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 PRKAB2O43741 272 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 MYBL2P10244 700 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 TDO2P48775 406 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 E2F4Q16254 413 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 CT47A1Q5JQC4 288 aaPredicted RBP17.16■□□□□ 0.34
VAT1-201ENST00000355653 SH3RF1Q7Z6J0 888 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 TADA2BQ86TJ2 420 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 MAGEB6Q8N7X4 407 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 DEF6Q9H4E7 631 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 ABCC12Q96J65 1359 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 MYO5AQ9Y4I1 1855 aaKnown RBP17.16■□□□□ 0.34
VAT1-201ENST00000355653 TCP11X2Q5H9J9 407 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 NELFBQ8WX92 580 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 KRT23Q9C075 422 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
VAT1-201ENST00000355653 LIMA1Q9UHB6 759 aaKnown RBP17.16■□□□□ 0.34
VAT1-201ENST00000355653 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
VAT1-201ENST00000355653 ZNF185O15231 689 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 LIG3P49916 1009 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 PAK1Q13153 545 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 FANCBQ8NB91 859 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 FAM76AQ8TAV0 307 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 SELENOOQ9BVL4 669 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 KAT14Q9H8E8 782 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 GNL3LQ9NVN8 582 aaKnown RBP17.15■□□□□ 0.34
VAT1-201ENST00000355653 RIC1Q4ADV7 1423 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 TTC26A0AVF1 554 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 ITGA6P23229 1130 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 MCM3P25205 808 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 JAKMIP2Q96AA8 810 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 SHISA4Q96DD7 197 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 EHD4Q9H223 541 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 GREM2Q9H772 168 aa17.15■□□□□ 0.34
VAT1-201ENST00000355653 XDHP47989 1333 aa17.14■□□□□ 0.34
VAT1-201ENST00000355653 CCDC196A0A1B0GTZ2 297 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 TCRBV5S4A2TA0A5A2 114 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 GOLGA6CA6NDK9 693 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 PSMD14O00487 310 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 GOLGA6DP0CG33 693 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 GUCY2CP25092 1073 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 TRIM14Q14142 442 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 TTC19Q6DKK2 380 aaPredicted RBP17.14■□□□□ 0.33
VAT1-201ENST00000355653 ZNF654Q8IZM8 581 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 HELBQ8NG08 1087 aaPredicted RBP17.14■□□□□ 0.33
VAT1-201ENST00000355653 GOLGA6AQ9NYA3 693 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 C2orf54Q08AI8 447 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 TCIRG1Q13488 830 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 HAUS4Q9H6D7 363 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 RIPOR2Q9Y4F9 1068 aa17.14■□□□□ 0.33
VAT1-201ENST00000355653 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
VAT1-201ENST00000355653 ATRNO75882 1429 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 GOLGA6BA6NDN3 693 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 GPTP24298 496 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 KRT2P35908 639 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 HERVK_113P62684 666 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 SPAG1Q07617 926 aa17.13■□□□□ 0.33
VAT1-201ENST00000355653 TSR1Q2NL82 804 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms