RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 XDHP47989 1333 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 FAM205CA6NFA0 338 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 LDHCP07864 332 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 PRR29P0C7W0 189 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 USP5P45974 858 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 NLRP5P59047 1200 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 USP49Q70CQ1 688 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 CERS3Q8IU89 383 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 CNBD1Q8NA66 436 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 KIF18AQ8NI77 898 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 PYM1Q9BRP8 204 aaKnown RBP25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 KAT14Q9H8E8 782 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 KIAA1551Q9HCM1 1747 aa25.39■■□□□ 1.65
NKX2-1-201ENST00000354822 TOP1P11387 765 aaKnown RBP25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 CALML3P27482 149 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 PPP4CP60510 307 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 E4F1Q66K89 784 aaPredicted RBP25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 ZNF804AQ7Z570 1209 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 ANKRD7Q92527 254 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 ZNF592Q92610 1267 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 DPF2Q92785 391 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 ATP2C1P98194 919 aaPredicted RBP25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 RCSD1Q6JBY9 416 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 SH3GLB2Q9NR46 395 aa25.38■■□□□ 1.65
NKX2-1-201ENST00000354822 CDK11BP21127 795 aaKnown RBP25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 GNAQP50148 359 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 SLC27A3Q5K4L6 730 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 SH3RF1Q7Z6J0 888 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 DHX58Q96C10 678 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 USP17L8P0C7I0 530 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 ZNF18P17022 549 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 TFAP4Q01664 338 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 EVX2Q03828 476 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 ZNF174Q15697 407 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 SYMPKQ92797 1274 aaKnown RBP25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 EPSTI1Q96J88 318 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 TCP11L1Q9NUJ3 509 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 NFE2L3Q9Y4A8 694 aa25.37■■□□□ 1.65
NKX2-1-201ENST00000354822 PLCD1P51178 756 aa25.36■■□□□ 1.65
NKX2-1-201ENST00000354822 TMX1Q9H3N1 280 aa25.36■■□□□ 1.65
NKX2-1-201ENST00000354822 PTGDRQ13258 359 aa25.35■■□□□ 1.65
NKX2-1-201ENST00000354822 GSDMAQ96QA5 445 aa25.35■■□□□ 1.65
NKX2-1-201ENST00000354822 ROBO3Q96MS0 1386 aa25.35■■□□□ 1.65
NKX2-1-201ENST00000354822 GRAMD1CQ8IYS0 662 aa25.35■■□□□ 1.65
NKX2-1-201ENST00000354822 PAGE5Q96GU1 130 aa25.35■■□□□ 1.65
NKX2-1-201ENST00000354822 MKNK2Q9HBH9 465 aa25.35■■□□□ 1.65
NKX2-1-201ENST00000354822 JAG2Q9Y219 1238 aa25.35■■□□□ 1.65
NKX2-1-201ENST00000354822 PPP1R13BQ96KQ4 1090 aa25.34■■□□□ 1.65
NKX2-1-201ENST00000354822 ZNF287Q9HBT7 754 aa25.34■■□□□ 1.65
NKX2-1-201ENST00000354822 FMR1Q06787 632 aaKnown RBP eCLIP25.34■■□□□ 1.65
NKX2-1-201ENST00000354822 PRR5LQ6MZQ0 368 aa25.34■■□□□ 1.65
NKX2-1-201ENST00000354822 PNMA1Q8ND90 353 aa25.34■■□□□ 1.65
NKX2-1-201ENST00000354822 BRWD3Q6RI45 1802 aa25.33■■□□□ 1.65
NKX2-1-201ENST00000354822 FCHSD1Q86WN1 690 aa25.33■■□□□ 1.65
NKX2-1-201ENST00000354822 SH3RF3Q8TEJ3 882 aaPredicted RBP25.33■■□□□ 1.65
NKX2-1-201ENST00000354822 CCDC94Q9BW85 323 aaPredicted RBP25.33■■□□□ 1.65
NKX2-1-201ENST00000354822 IL17RBQ9NRM6 502 aa25.33■■□□□ 1.65
NKX2-1-201ENST00000354822 A0A087X0B3 334 aa25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 GYS1P13807 737 aa25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 ARL6IP4Q66PJ3 421 aaKnown RBP25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 PIK3AP1Q6ZUJ8 805 aa25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 KRT27Q7Z3Y8 459 aa25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 ZNF444Q8N0Y2 327 aaPredicted RBP25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 FAM177A1Q8N128 213 aaPredicted RBP25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 IQUBQ8NA54 791 aa25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 VWA3AA6NCI4 1184 aa25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 PDCL2Q8N4E4 241 aa25.32■■□□□ 1.64
NKX2-1-201ENST00000354822 DPYDQ12882 1025 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 GRM4Q14833 912 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 BLIDQ8IZY5 108 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 WNT7AO00755 349 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 TSPY3P0CV98 308 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 TSPY8P0CW00 308 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 AFMP43652 599 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 TBX2Q13207 712 aaPredicted RBP25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 ZNF827Q17R98 1081 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 GALNT17Q6IS24 598 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 PCDHA4Q9UN74 947 aa25.31■■□□□ 1.64
NKX2-1-201ENST00000354822 TMEM232C9JQI7 657 aa25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 ATP2B4P23634 1241 aa25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 NCBP1Q09161 790 aaKnown RBP25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 SPATA1Q5VX52 437 aa25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 SPECC1LQ69YQ0 1117 aa25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 UBE2Q2Q8WVN8 375 aa25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 LZTS2Q9BRK4 669 aa25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 INTS13Q9NVM9 706 aa25.3■■□□□ 1.64
NKX2-1-201ENST00000354822 ST5P78524 1137 aa25.29■■□□□ 1.64
NKX2-1-201ENST00000354822 NOM1Q5C9Z4 860 aaKnown RBP25.29■■□□□ 1.64
NKX2-1-201ENST00000354822 ARHGAP6O43182 974 aa25.29■■□□□ 1.64
NKX2-1-201ENST00000354822 SERPINB2P05120 415 aa25.29■■□□□ 1.64
NKX2-1-201ENST00000354822 DYNLL2Q96FJ2 89 aa25.29■■□□□ 1.64
NKX2-1-201ENST00000354822 TRIM37O94972 964 aa25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 LONP1P36776 959 aaKnown RBP25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 CCDC148Q8NFR7 591 aa25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 TGFBRAP1Q8WUH2 860 aa25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 ZSCAN12O43309 604 aa25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 NR1I3Q14994 352 aa25.28■■□□□ 1.64
NKX2-1-201ENST00000354822 DIXDC1Q155Q3 683 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms