RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
COL11A1-201ENST00000353414 SYNRGQ9UMZ2 1314 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 PCK1P35558 622 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 C17orf53Q8N3J3 647 aaPredicted RBP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 SDR42E1Q8WUS8 393 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 GPAA1O43292 621 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 GUCY2FP51841 1108 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 KRBA2Q6ZNG9 492 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 LCA5Q86VQ0 697 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 KRT222Q8N1A0 295 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 NOX5Q96PH1 765 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 MTRQ99707 1265 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 GAS7O60861 476 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 DHX32Q7L7V1 743 aaKnown RBP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 C2CD5Q86YS7 1000 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 TRIM56Q9BRZ2 755 aaKnown RBP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 LSM14BQ9BX40 385 aaKnown RBP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 PARP2Q9UGN5 583 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 TRIM37O94972 964 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 MARK3P27448 753 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 POLA2Q14181 598 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 RBBP5Q15291 538 aaKnown RBP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 MIER3Q7Z3K6 550 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 ZBTB33Q86T24 672 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 FAM207AQ9NSI2 230 aaPredicted RBP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 ITM2BQ9Y287 266 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 LRRIQ4A6NIV6 560 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 OSTNP61366 133 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 FAM76AQ8TAV0 307 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 GCP02774 474 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 LIG4P49917 911 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 FBXW4P57775 412 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 SNAP25P60880 206 aa11.05□□□□□ -0.64
COL11A1-201ENST00000353414 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL11A1-201ENST00000353414 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 SPAG1Q07617 926 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 PALM2Q8IXS6 379 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 MORC4Q8TE76 937 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 CSRNP2Q9H175 543 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 BUB1O43683 1085 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 XPAP23025 273 aaPredicted RBP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 HAUS3Q68CZ6 603 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 GBP6Q6ZN66 633 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 NELFBQ8WX92 580 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 RBSNQ9H1K0 784 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 LGR6Q9HBX8 967 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 PTPN22Q9Y2R2 807 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 TIAM1Q13009 1591 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 KRT33BQ14525 404 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 ERCC6LQ2NKX8 1250 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 ANO4Q32M45 955 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 XKR9Q5GH70 373 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 KRT12Q99456 494 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 TACO1Q9BSH4 297 aaKnown RBP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 CETN3O15182 167 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 TFAP4Q01664 338 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 TTC38Q5R3I4 469 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 C8orf74Q6P047 294 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 CABP7Q86V35 215 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 AFAP1L2Q8N4X5 818 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 MCUR1Q96AQ8 359 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 RPS6KC1Q96S38 1066 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 DBNDD2Q9BQY9 259 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 ZNF532Q9HCE3 1301 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 SND1Q7KZF4 910 aaKnown RBP eCLIP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 U2AF1L4Q8WU68 220 aaKnown RBP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 SEPT9Q9UHD8 586 aaPredicted RBP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 ZAP70P43403 619 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 LACTBP83111 547 aaPredicted RBP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 HACE1Q8IYU2 909 aa11.04□□□□□ -0.64
COL11A1-201ENST00000353414 ZNF513Q8N8E2 541 aaPredicted RBP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
COL11A1-201ENST00000353414 STAM2O75886 525 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 FLOT1O75955 427 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 CCDC127Q96BQ5 260 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 SWAP70Q9UH65 585 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 GPKOWQ92917 476 aaPredicted RBP eCLIP11.03□□□□□ -0.64
COL11A1-201ENST00000353414 HDAC11Q96DB2 347 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 RSRC1Q96IZ7 334 aaKnown RBP11.03□□□□□ -0.64
COL11A1-201ENST00000353414 K7ENM7 598 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 BAG2O95816 211 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 PIK3CAP42336 1068 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 GYG1P46976 350 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 MFSD14BQ5SR56 506 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 RAPH1Q70E73 1250 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 I3L4J1 428 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 PDE8AO60658 829 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 ADCY1Q08828 1119 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 PNOCQ13519 176 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 RRAGAQ7L523 313 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 ORAI2Q96SN7 254 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 POLGP54098 1239 aaPredicted RBP11.03□□□□□ -0.64
COL11A1-201ENST00000353414 SESN3P58005 492 aa11.03□□□□□ -0.64
COL11A1-201ENST00000353414 CCDC62Q6P9F0 684 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms