RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 IL17RBQ9NRM6 502 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 KIAA1468Q9P260 1216 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 CLIC4Q9Y696 253 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 TNKSO95271 1327 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 PSMD14O00487 310 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 POLR3DP05423 398 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-204ENST00000353317 LIFRP42702 1097 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 NTRK3Q16288 839 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 DALRD3Q5D0E6 543 aaKnown RBP9.88□□□□□ -0.83
TRIM55-204ENST00000353317 RCSD1Q6JBY9 416 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 TMED8Q6PL24 325 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-204ENST00000353317 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 OSBPL5Q9H0X9 879 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-204ENST00000353317 KCND1Q9NSA2 647 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 USP40Q9NVE5 1235 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 ARPP21Q9UBL0 812 aaPredicted RBP9.88□□□□□ -0.83
TRIM55-204ENST00000353317 SUGT1Q9Y2Z0 365 aa9.88□□□□□ -0.83
TRIM55-204ENST00000353317 A0A1W2PQ27 194 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 A0A1W2PQ64 194 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 A0A1W2PQD8 194 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 ORC4O43929 436 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 E4F1Q66K89 784 aaPredicted RBP9.87□□□□□ -0.83
TRIM55-204ENST00000353317 HHIPL2Q6UWX4 724 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 LARGE2Q8N3Y3 721 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 PRMT6Q96LA8 375 aaPredicted RBP9.87□□□□□ -0.83
TRIM55-204ENST00000353317 GMLQ99445 158 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 BCS1LQ9Y276 419 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 MORC2Q9Y6X9 1032 aaPredicted RBP9.87□□□□□ -0.83
TRIM55-204ENST00000353317 GSDMDP57764 484 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 RASSF7Q02833 373 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 ESR2Q92731 530 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 PHKBQ93100 1093 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 TEKT1Q969V4 418 aa9.87□□□□□ -0.83
TRIM55-204ENST00000353317 ZSCAN10Q96SZ4 725 aaPredicted RBP9.87□□□□□ -0.83
TRIM55-204ENST00000353317 XPO4Q9C0E2 1151 aaKnown RBP9.87□□□□□ -0.83
TRIM55-204ENST00000353317 RNF41Q9H4P4 317 aaPredicted RBP9.87□□□□□ -0.83
TRIM55-204ENST00000353317 RASA1P20936 1047 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 STK38Q15208 465 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 SF3A1Q15459 793 aaKnown RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 ELF2Q15723 593 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 SHROOM1Q2M3G4 852 aaPredicted RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 ARMCX5Q6P1M9 558 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 SH3BP5LQ7L8J4 393 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 RASGRP2Q7LDG7 609 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 CHMP4CQ96CF2 233 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 ZDHHC15Q96MV8 337 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 POLR3EQ9NVU0 708 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 IFNKQ9P0W0 207 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 IMPACTQ9P2X3 320 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 FAM198AQ9UFP1 575 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 MYH6P13533 1939 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 ROBO3Q96MS0 1386 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 MYH8P13535 1937 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 BIN1O00499 593 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 VIL1P09327 827 aaKnown RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 GUCY1A2P33402 732 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 IARSP41252 1262 aaKnown RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 TFAP4Q01664 338 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 CXCL9Q07325 125 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 WTAPQ15007 396 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 FBXO38Q6PIJ6 1188 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 NFXL1Q6ZNB6 911 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 CCDC82Q8N4S0 544 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 SUPT20HQ8NEM7 779 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 ZNF397Q8NF99 534 aaPredicted RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 FBXO18Q8NFZ0 1043 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 KCNG4Q8TDN1 519 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 ERO1AQ96HE7 468 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 C8orf76Q96K31 380 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 BPIFA3Q9BQP9 254 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 NOL10Q9BSC4 688 aaKnown RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 TDRD3Q9H7E2 651 aaKnown RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 CD2APQ9Y5K6 639 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 FAM196BA6NMK8 535 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 SPTLC2O15270 562 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 ZBTB43O43298 467 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 SMC2O95347 1197 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 CDK8P49336 464 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 FKBP1AP62942 108 aaKnown RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 TCP10Q12799 353 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 NCAPHQ15003 741 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
TRIM55-204ENST00000353317 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 SCAF8Q9UPN6 1271 aaKnown RBP9.86□□□□□ -0.83
TRIM55-204ENST00000353317 DDTLA6NHG4 134 aaPredicted RBP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 KIF28PB7ZC32 967 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 ZNF202O95125 648 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 SLU7O95391 586 aaKnown RBP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 YEATS4O95619 227 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 EGFRP00533 1210 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 RBM5P52756 815 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 GABPAQ06546 454 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 TROAPQ12815 778 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 ZRSR1Q15695 479 aaKnown RBP9.85□□□□□ -0.83
TRIM55-204ENST00000353317 C16orf86Q6ZW13 317 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 TMC6Q7Z403 805 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 SLF2Q8IX21 1173 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 ZNF654Q8IZM8 581 aa9.85□□□□□ -0.83
TRIM55-204ENST00000353317 SHISA4Q96DD7 197 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms