RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 PDE4BQ07343 736 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 ALX1Q15699 326 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 TTC22Q5TAA0 569 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 ZNF444Q8N0Y2 327 aaPredicted RBP24.78■■□□□ 1.56
MRPL39-202ENST00000352957 SPICE1Q8N0Z3 855 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 RAET1EQ8TD07 263 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 SH3TC2Q8TF17 1288 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 GTF3C2Q8WUA4 911 aaPredicted RBP24.78■■□□□ 1.56
MRPL39-202ENST00000352957 PAGR1Q9BTK6 254 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 DIAPH3Q9NSV4 1193 aa24.78■■□□□ 1.56
MRPL39-202ENST00000352957 PLXNB2O15031 1838 aa24.77■■□□□ 1.56
MRPL39-202ENST00000352957 HSPD1P10809 573 aaKnown RBP24.77■■□□□ 1.56
MRPL39-202ENST00000352957 RGS19P49795 217 aa24.77■■□□□ 1.56
MRPL39-202ENST00000352957 GPRC5AQ8NFJ5 357 aa24.77■■□□□ 1.56
MRPL39-202ENST00000352957 LPAR1Q92633 364 aa24.77■■□□□ 1.56
MRPL39-202ENST00000352957 ZNF333Q96JL9 665 aa24.77■■□□□ 1.56
MRPL39-202ENST00000352957 TANGO6Q9C0B7 1094 aa24.77■■□□□ 1.56
MRPL39-202ENST00000352957 A0A0G2JMZ2 1700 aa24.76■■□□□ 1.55
MRPL39-202ENST00000352957 ERVK-9P63128 1117 aa24.76■■□□□ 1.55
MRPL39-202ENST00000352957 ERVK-24P63145 666 aa24.76■■□□□ 1.55
MRPL39-202ENST00000352957 Q3C1V9 767 aa24.76■■□□□ 1.55
MRPL39-202ENST00000352957 CWC27Q6UX04 472 aaKnown RBP24.76■■□□□ 1.55
MRPL39-202ENST00000352957 NBPF11Q86T75 865 aa24.76■■□□□ 1.55
MRPL39-202ENST00000352957 COA7Q96BR5 231 aa24.76■■□□□ 1.55
MRPL39-202ENST00000352957 IGKV6D-41A0A0C4DH26 115 aa24.75■■□□□ 1.55
MRPL39-202ENST00000352957 SPDYE16A6NNV3 312 aaPredicted RBP24.75■■□□□ 1.55
MRPL39-202ENST00000352957 HIP1O00291 1037 aa24.75■■□□□ 1.55
MRPL39-202ENST00000352957 CNMDO75829 334 aa24.75■■□□□ 1.55
MRPL39-202ENST00000352957 FGAP02671 866 aa24.75■■□□□ 1.55
MRPL39-202ENST00000352957 FLT3LGP49771 235 aa24.75■■□□□ 1.55
MRPL39-202ENST00000352957 INCENPQ9NQS7 918 aa24.75■■□□□ 1.55
MRPL39-202ENST00000352957 ANAPC4Q9UJX5 808 aa24.75■■□□□ 1.55
MRPL39-202ENST00000352957 MFAP1P55081 439 aaKnown RBP24.74■■□□□ 1.55
MRPL39-202ENST00000352957 FAM47AQ5JRC9 791 aa24.74■■□□□ 1.55
MRPL39-202ENST00000352957 LBX2Q6XYB7 198 aa24.74■■□□□ 1.55
MRPL39-202ENST00000352957 GOPCQ9HD26 462 aa24.74■■□□□ 1.55
MRPL39-202ENST00000352957 NYAP2Q9P242 653 aa24.74■■□□□ 1.55
MRPL39-202ENST00000352957 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.74■■□□□ 1.55
MRPL39-202ENST00000352957 RABGAP1Q9Y3P9 1069 aa24.74■■□□□ 1.55
MRPL39-202ENST00000352957 TACC3Q9Y6A5 838 aa24.74■■□□□ 1.55
MRPL39-202ENST00000352957 CENPFP49454 3210 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 LAMA4Q16363 1823 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 PLIN4Q96Q06 1357 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 ZMYM6O95789 1325 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 WDR46O15213 610 aaKnown RBP24.73■■□□□ 1.55
MRPL39-202ENST00000352957 TSPY3P0CV98 308 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 TSPY8P0CW00 308 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 GRK4P32298 578 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 COG2Q14746 738 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 NEDD1Q8NHV4 660 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 CEP95Q96GE4 821 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 BTBD7Q9P203 1132 aa24.73■■□□□ 1.55
MRPL39-202ENST00000352957 COL11A1P12107 1806 aaPredicted RBP24.72■■□□□ 1.55
MRPL39-202ENST00000352957 RAD21O60216 631 aa24.72■■□□□ 1.55
MRPL39-202ENST00000352957 MYCP01106 439 aaPredicted RBP24.72■■□□□ 1.55
MRPL39-202ENST00000352957 TFAP4Q01664 338 aa24.72■■□□□ 1.55
MRPL39-202ENST00000352957 PORCNQ9H237 461 aa24.72■■□□□ 1.55
MRPL39-202ENST00000352957 MTMR4Q9NYA4 1195 aa24.72■■□□□ 1.55
MRPL39-202ENST00000352957 CLIP2Q9UDT6 1046 aa24.72■■□□□ 1.55
MRPL39-202ENST00000352957 POTEFA5A3E0 1075 aa24.71■■□□□ 1.55
MRPL39-202ENST00000352957 ADCY3O60266 1144 aa24.71■■□□□ 1.55
MRPL39-202ENST00000352957 IRF5Q13568 498 aa24.71■■□□□ 1.55
MRPL39-202ENST00000352957 FLOT1O75955 427 aa24.7■■□□□ 1.54
MRPL39-202ENST00000352957 MAPK4P31152 587 aa24.7■■□□□ 1.54
MRPL39-202ENST00000352957 SLAIN1Q8ND83 568 aa24.7■■□□□ 1.54
MRPL39-202ENST00000352957 HOXC10Q9NYD6 342 aa24.7■■□□□ 1.54
MRPL39-202ENST00000352957 GJD2Q9UKL4 321 aa24.7■■□□□ 1.54
MRPL39-202ENST00000352957 TTLL1O95922 423 aa24.69■■□□□ 1.54
MRPL39-202ENST00000352957 ELNP15502 786 aa24.69■■□□□ 1.54
MRPL39-202ENST00000352957 DSG3P32926 999 aa24.69■■□□□ 1.54
MRPL39-202ENST00000352957 HAND2P61296 217 aa24.69■■□□□ 1.54
MRPL39-202ENST00000352957 MLLT1Q03111 559 aaPredicted RBP24.69■■□□□ 1.54
MRPL39-202ENST00000352957 FAM83BQ5T0W9 1011 aa24.69■■□□□ 1.54
MRPL39-202ENST00000352957 SAMD1Q6SPF0 538 aaPredicted RBP24.69■■□□□ 1.54
MRPL39-202ENST00000352957 CCAR1Q8IX12 1150 aaKnown RBP24.69■■□□□ 1.54
MRPL39-202ENST00000352957 BIN2Q9UBW5 565 aaPredicted RBP24.69■■□□□ 1.54
MRPL39-202ENST00000352957 TSPY2A6NKD2 308 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 F5H6K3 240 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 ORC4O43929 436 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 FGRP09769 529 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 CCNA1P78396 465 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 KLRC3Q07444 240 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 CENPQQ7L2Z9 268 aaPredicted RBP24.68■■□□□ 1.54
MRPL39-202ENST00000352957 GPR142Q7Z601 462 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 MKL1Q969V6 931 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 ATG4CQ96DT6 458 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 NUP88Q99567 741 aaPredicted RBP24.68■■□□□ 1.54
MRPL39-202ENST00000352957 IL25Q9H293 177 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 FBXO28Q9NVF7 368 aa24.68■■□□□ 1.54
MRPL39-202ENST00000352957 RANBP6O60518 1105 aaKnown RBP24.67■■□□□ 1.54
MRPL39-202ENST00000352957 NDUFB10O96000 172 aa24.67■■□□□ 1.54
MRPL39-202ENST00000352957 MTFR1Q15390 333 aa24.67■■□□□ 1.54
MRPL39-202ENST00000352957 LRRC47Q8N1G4 583 aaKnown RBP24.67■■□□□ 1.54
MRPL39-202ENST00000352957 PXYLP1Q8TE99 480 aa24.67■■□□□ 1.54
MRPL39-202ENST00000352957 TMEM106CQ9BVX2 250 aa24.67■■□□□ 1.54
MRPL39-202ENST00000352957 NBPF3Q9H094 633 aa24.67■■□□□ 1.54
MRPL39-202ENST00000352957 TOMM22Q9NS69 142 aa24.67■■□□□ 1.54
MRPL39-202ENST00000352957 RRP12Q5JTH9 1297 aaKnown RBP24.66■■□□□ 1.54
MRPL39-202ENST00000352957 PLEKHH3Q7Z736 793 aa24.66■■□□□ 1.54
MRPL39-202ENST00000352957 CWC22Q9HCG8 908 aaKnown RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms