RNA–Protein interactions for RNA: ENST00000350887.5

SNRNP35-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRNP35, Length 942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-201ENST00000350887 CMTR1Q8N1G2 835 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-201ENST00000350887 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
SNRNP35-201ENST00000350887 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
SNRNP35-201ENST00000350887 GPRC5DQ9NZD1 345 aa13.45□□□□□ -0.26
SNRNP35-201ENST00000350887 CLIP2Q9UDT6 1046 aa13.45□□□□□ -0.26
SNRNP35-201ENST00000350887 POLR2AP24928 1970 aaKnown RBP13.45□□□□□ -0.26
SNRNP35-201ENST00000350887 FIBPO43427 364 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 TBC1D12O60347 775 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 GDF11O95390 407 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 ICA1Q05084 483 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 DNM1Q05193 864 aaKnown RBP13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 GPR162Q16538 588 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 ASPRV1Q53RT3 343 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 C9orf131Q5VYM1 1079 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 SRBD1Q8N5C6 995 aaKnown RBP13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 ZNF396Q96N95 335 aaPredicted RBP13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 NYAP2Q9P242 653 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 CNPY2Q9Y2B0 182 aa13.44□□□□□ -0.26
SNRNP35-201ENST00000350887 TRAK2O60296 914 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 PRPF40AO75400 957 aaKnown RBP13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 SLURP2P0DP57 97 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 FUT2Q10981 343 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 RASA3Q14644 834 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 ATL3Q6DD88 541 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 CLEC10AQ8IUN9 316 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 TMEM87AQ8NBN3 555 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 CHAMP1Q96JM3 812 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 LMBRD1Q9NUN5 540 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 CFAP45Q9UL16 551 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 SCN4AP35499 1836 aa13.43□□□□□ -0.26
SNRNP35-201ENST00000350887 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 KLRF2D3W0D1 207 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 MBD3O95983 291 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 EGFRP00533 1210 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 GH2P01242 217 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 PDHBP11177 359 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 GUCY1A2P33402 732 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 KIF23Q02241 960 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 SEPT2Q15019 361 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 CCDC96Q2M329 555 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 HOOK2Q96ED9 719 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 SPZ1Q9BXG8 430 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 SCAND2PQ9GZW5 306 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 BRMS1Q9HCU9 246 aa13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 V9GY48 417 aaPredicted RBP13.42□□□□□ -0.26
SNRNP35-201ENST00000350887 GRIN3BO60391 1043 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 MMP1P03956 469 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 SCG2P13521 617 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 SMARCA1P28370 1054 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 PKN1Q16512 942 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 PFKFB3Q16875 520 aaPredicted RBP13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 DCAF15Q66K64 600 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 DPY19L2Q6NUT2 758 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 FAM173BQ6P4H8 233 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 TRPM4Q8TD43 1214 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 MKL1Q969V6 931 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 GDPD2Q9HCC8 539 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 GJB4Q9NTQ9 266 aa13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 SEC63Q9UGP8 760 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
SNRNP35-201ENST00000350887 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 hCG_1642624A0A1W2PR95 340 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 USP17L5A8MUK1 530 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 GOLGA8HP0CJ92 632 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 SNHG28P0DPA3 235 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 EPS15P42566 896 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 ANGEL2Q5VTE6 544 aaKnown RBP13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 DCAF4Q8WV16 495 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 SPATA32Q96LK8 384 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 ADARB2Q9NS39 739 aaKnown RBP13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 GGA3Q9NZ52 723 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 PGAP2Q9UHJ9 254 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 ZBTB21Q9ULJ3 1066 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 SYNPO2Q9UMS6 1093 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
SNRNP35-201ENST00000350887 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
SNRNP35-201ENST00000350887 RAD21O60216 631 aa13.39□□□□□ -0.27
SNRNP35-201ENST00000350887 KRT2P35908 639 aa13.39□□□□□ -0.27
SNRNP35-201ENST00000350887 ZNF543Q08ER8 600 aa13.39□□□□□ -0.27
SNRNP35-201ENST00000350887 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
SNRNP35-201ENST00000350887 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms