RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CUTAO60888 179 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 CAVIN2O95810 425 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 TOP1P11387 765 aaKnown RBP7.97□□□□□ -1.13
TRIM55-203ENST00000350034 PTPREP23469 700 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 KRT2P35908 639 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 CRKP46108 304 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 NDUFA8P51970 172 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 NR5A1Q13285 461 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 SLC4A8Q2Y0W8 1093 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 RESP18Q5W5W9 173 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 SHC4Q6S5L8 630 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 CKAP2LQ8IYA6 745 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 ELOA2Q8IYF1 753 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-203ENST00000350034 ZNF579Q8NAF0 562 aaKnown RBP7.97□□□□□ -1.13
TRIM55-203ENST00000350034 LZTS2Q9BRK4 669 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 IDI2Q9BXS1 227 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 PDGFDQ9GZP0 370 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-203ENST00000350034 OSBPL5Q9H0X9 879 aaPredicted RBP7.97□□□□□ -1.13
TRIM55-203ENST00000350034 EHD4Q9H223 541 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 DBNDD1Q9H9R9 158 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 SH3GLB2Q9NR46 395 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 KCNQ5Q9NR82 932 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 USP40Q9NVE5 1235 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 SWAP70Q9UH65 585 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 MAD2L2Q9UI95 211 aa7.97□□□□□ -1.13
TRIM55-203ENST00000350034 GOLGB1Q14789 3259 aaKnown RBP7.97□□□□□ -1.13
TRIM55-203ENST00000350034 A0A1B0GVL5 298 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 F8W031 263 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 G3V3G9 751 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 CYTH3O43739 400 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF202O95125 648 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 VEGFAP15692 232 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 PFKFB1P16118 471 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 KCNA3P22001 575 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 MARCKSP29966 332 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 SCNN1DP51172 638 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 GNL2Q13823 731 aaKnown RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 EARS2Q5JPH6 523 aaKnown RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 DCAF8Q5TAQ9 597 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 SASS6Q6UVJ0 657 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 STAG2Q8N3U4 1231 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 KRI1Q8N9T8 703 aaKnown RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 DAGLBQ8NCG7 672 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 FBXW7Q969H0 707 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 SPZ1Q9BXG8 430 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 GPBP1L1Q9HC44 474 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 FBXO2Q9UK22 296 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 SERPINA10Q9UK55 444 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 ZNF646O15015 1829 aaPredicted RBP7.96□□□□□ -1.14
TRIM55-203ENST00000350034 CDK5RAP2Q96SN8 1893 aa7.96□□□□□ -1.14
TRIM55-203ENST00000350034 FOCADQ5VW36 1801 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 hCG_1642624A0A1W2PR95 340 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 FAM205CA6NFA0 338 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 TRIM75PA6NK02 468 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 YDJCA8MPS7 323 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 M0R2N6 131 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 AP5Z1O43299 807 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 BMP15O95972 392 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 SNHG28P0DPA3 235 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 CALML3P27482 149 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 SHMT1P34896 483 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 TRAPPC10P48553 1259 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 NFIAQ12857 509 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 IQCB1Q15051 598 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 AOC3Q16853 763 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 ANO6Q4KMQ2 910 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 GALNT17Q6IS24 598 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 METTL16Q86W50 562 aaKnown RBP7.95□□□□□ -1.14
TRIM55-203ENST00000350034 TTLL6Q8N841 843 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 CEP95Q96GE4 821 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 PSMD1Q99460 953 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 SYT17Q9BSW7 474 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 VPS33BQ9H267 617 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 CBX8Q9HC52 389 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 BRMS1Q9HCU9 246 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 CABP5Q9NP86 173 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 RRAGDQ9NQL2 400 aaPredicted RBP7.95□□□□□ -1.14
TRIM55-203ENST00000350034 MTMR4Q9NYA4 1195 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 SERPINB13Q9UIV8 391 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 CEP131Q9UPN4 1083 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 PCDHB6Q9Y5E3 794 aa7.95□□□□□ -1.14
TRIM55-203ENST00000350034 SRPRBQ9Y5M8 271 aaKnown RBP7.95□□□□□ -1.14
TRIM55-203ENST00000350034 COL2A1P02458 1487 aaPredicted RBP7.94□□□□□ -1.14
TRIM55-203ENST00000350034 ESPNB1AK53 854 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 KLRF2D3W0D1 207 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 ADAMTS3O15072 1205 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 C21orf2O43822 256 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 HLA-DOAP06340 250 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 AKR1B1P15121 316 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 DPEP1P16444 411 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 SYKP43405 635 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 NLRP5P59047 1200 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 PICALMQ13492 652 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 STX1AQ16623 288 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 CCDC93Q567U6 631 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 TYW1BQ6NUM6 668 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 SH3BP5LQ7L8J4 393 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 KIAA0825Q8IV33 1275 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 ZFPM1Q8IX07 1006 aa7.94□□□□□ -1.14
TRIM55-203ENST00000350034 RTKN2Q8IZC4 609 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms